RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 FOXS1O43638 330 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 KDELR3O43731 214 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 SPOPO43791 374 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 LRCH4O75427 683 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 KATNA1O75449 491 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PALMO75781 387 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 LY86O95711 162 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 JUNP05412 331 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 VSIG10L2P0DP72 767 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 SRCP12931 536 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TCF4P15884 667 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ERCC2P18074 760 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CD6P30203 668 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 MAT2AP31153 395 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 HNRNPH3P31942 346 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CHRNA3P32297 505 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 RPS19P39019 145 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PAPOLAP51003 745 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TPMTP51580 245 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PLK1P53350 603 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ATXN3P54252 364 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 AIF1P55008 147 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 RHOAP61586 193 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 RAD51Q06609 339 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 RIN1Q13671 783 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 HNRNPA1L2Q32P51 320 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PLK5Q496M5 336 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TTC31Q49AM3 519 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 AASDHQ4L235 1098 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CARD16Q5EG05 197 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 SYCP2LQ5T4T6 812 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 C9orf64Q5T6V5 341 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CCDC181Q5TID7 509 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 KAZNQ674X7 775 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ZNF776Q68DI1 518 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 LAIR1Q6GTX8 287 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CXorf57Q6NSI4 855 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PGM2L1Q6PCE3 622 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 DBX2Q6ZNG2 339 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 DSG4Q86SJ6 1040 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 RFX6Q8HWS3 928 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CCDC50Q8IVM0 306 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 MAP7D3Q8IWC1 876 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 GPR135Q8IZ08 494 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 SH2D3CQ8N5H7 860 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ARFGAP1Q8N6T3 406 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 SUMF1Q8NBK3 374 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CCNYQ8ND76 341 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 OR6K2Q8NGY2 324 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 NSMCE1Q8WV22 266 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 KLK6Q92876 244 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ARHGEF2Q92974 986 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 NTAN1Q96AB6 310 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 HMCESQ96FZ2 354 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CCDC114Q96M63 670 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PANX2Q96RD6 677 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PEBP4Q96S96 227 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 GABRG3Q99928 467 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 GTPBP2Q9BX10 602 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TM6SF2Q9BZW4 377 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 BRINP2Q9C0B6 783 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 SLC39A8Q9C0K1 460 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 KLC2Q9H0B6 622 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 MAGEH1Q9H213 219 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 NEUROG2Q9H2A3 272 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 NELFAQ9H3P2 528 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ZDHHC6Q9H6R6 413 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TMEM248Q9NWD8 314 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ING3Q9NXR8 418 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 DONSONQ9NYP3 566 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CWC15Q9P013 229 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 UVRAGQ9P2Y5 699 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 HECAQ9UBI9 543 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 IL36AQ9UHA7 158 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 EIF2B4Q9UI10 523 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 VPS51Q9UID3 782 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ST6GALNAC2Q9UJ37 374 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ZFR2Q9UPR6 939 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TBC1D30Q9Y2I9 924 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 CABIN1Q9Y6J0 2220 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 ARHGEF17Q96PE2 2063 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-237ENST00000556274 hCG_2014768A0A024R1R8 64 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 IGLV3-10A0A075B6K4 115 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 IGHV1OR15-9A0A0B4J2B8 117 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-237ENST00000556274 A0A1W2PR48 441 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 MACROD2A1Z1Q3 448 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 LRRD1A4D1F6 860 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 PMS2P1A4D2B8 440 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 LRRC72A6NJI9 287 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 A8MX80 341 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 PATE3B3GLJ2 98 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 C1QTNF3-AMACRE9PGA6 284 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 J3KR12 359 aa4.7□□□□□ -1.66
ATXN3-237ENST00000556274 PROSCO94903 275 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms