RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 RFX6Q8HWS3 928 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 TRIM48Q8IWZ4 208 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 ESX1Q8N693 406 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 BRSK1Q8TDC3 778 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 C9orf72Q96LT7 481 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 TEKT5Q96M29 485 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 OSGEPL1Q9H4B0 414 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 GLOD4Q9HC38 313 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 POT1Q9NUX5 634 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 SHOC2Q9UQ13 582 aa11.34□□□□□ -0.59
LRP1-209ENST00000555941 UBXN7O94888 489 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 CDK14O94921 469 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 KRT1P04264 644 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 BPIP17213 487 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 AMD1P17707 334 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 IDSP22304 550 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 HMGCLP35914 325 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 SLC19A1P41440 591 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 TNNT3P45378 269 aaPredicted RBP11.33□□□□□ -0.6
LRP1-209ENST00000555941 PRKD1Q15139 912 aaPredicted RBP11.33□□□□□ -0.6
LRP1-209ENST00000555941 PCSK7Q16549 785 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 CYB5D1Q6P9G0 228 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 KDELC2Q7Z4H8 507 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 VAT1Q99536 393 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 CTRCQ99895 268 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 TBC1D10AQ9BXI6 508 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 CEP41Q9BYV8 373 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 NHEJ1Q9H9Q4 299 aaPredicted RBP11.33□□□□□ -0.6
LRP1-209ENST00000555941 ABHD10Q9NUJ1 306 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 SIDT1Q9NXL6 827 aaKnown RBP11.33□□□□□ -0.6
LRP1-209ENST00000555941 HACD3Q9P035 362 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 ZNF624Q9P2J8 865 aaPredicted RBP11.33□□□□□ -0.6
LRP1-209ENST00000555941 EPHA6Q9UF33 1036 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 SLC23A2Q9UGH3 650 aa11.33□□□□□ -0.6
LRP1-209ENST00000555941 LOC285095A0A1B0GVY8 99 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 PDZK1P1A8MUH7 402 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 PMPCBO75439 489 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 DLGAP3O95886 979 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 MT-CYBP00156 380 aaPredicted RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 PIRTP0C851 137 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 PTPN3P26045 913 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 STAT5AP42229 794 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 TMEM115Q12893 351 aaPredicted RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 GTF2H3Q13889 308 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 TAZQ16635 292 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 ZNF648Q5T619 568 aaPredicted RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 CRTC3Q6UUV7 619 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 NPNTQ6UXI9 565 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 TIPARPQ7Z3E1 657 aaKnown RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 PRSS42Q7Z5A4 293 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 ZNF547Q8IVP9 402 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 SPATA22Q8NHS9 363 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 TFB1MQ8WVM0 346 aaKnown RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 ZDHHC12Q96GR4 267 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 TTC25Q96NG3 672 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 ZCCHC2Q9C0B9 1178 aaKnown RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 RAB33BQ9H082 229 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 ZNF768Q9H5H4 540 aaKnown RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 SLC40A1Q9NP59 571 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 ARFGAP3Q9NP61 516 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 OGFRQ9NZT2 677 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 SCHIP1Q9P0W5 487 aaPredicted RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 KLHL3Q9UH77 587 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 FAM153AQ9UHL3 310 aa11.32□□□□□ -0.6
LRP1-209ENST00000555941 DNMT3AQ9Y6K1 912 aaPredicted RBP11.32□□□□□ -0.6
LRP1-209ENST00000555941 LOC101059948A0A1B0GTJ6 334 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 GOLGA6L3A6NEY3 463 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 NKX2-8O15522 239 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 PSTPIP1O43586 416 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 SPOPO43791 374 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 RECKO95980 971 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 SLC4A1P02730 911 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 HALP42357 657 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 CDKN2BP42772 138 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 CAPZBP47756 277 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 HADHBP55084 474 aaKnown RBP11.31□□□□□ -0.6
LRP1-209ENST00000555941 DYNLT1P63172 113 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 FOXM1Q08050 763 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 DMPKQ09013 629 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 CDC20Q12834 499 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 SKOR2Q2VWA4 1001 aaPredicted RBP11.31□□□□□ -0.6
LRP1-209ENST00000555941 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 LDLRAP1Q5SW96 308 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 KLHL35Q6PF15 583 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 C6orf15Q6UXA7 325 aaPredicted RBP11.31□□□□□ -0.6
LRP1-209ENST00000555941 MFSD7Q6UXD7 560 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 VSTM4Q8IW00 320 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 KLHL6Q8WZ60 621 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 CXorf40BQ96DE9 158 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 CHP1Q99653 195 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 ULBP3Q9BZM4 244 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 APMAPQ9HDC9 416 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 IL26Q9NPH9 171 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 SPTLC3Q9NUV7 552 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 ANAPC2Q9UJX6 822 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 DNAJC16Q9Y2G8 782 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 PCDHB3Q9Y5E6 796 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms