RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 MYRFLQ96LU7 910 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SEPT5Q99719 369 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 MGME1Q9BQP7 344 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 HGH1Q9BTY7 390 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SPON2Q9BUD6 331 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ADGRE3Q9BY15 652 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 NACA2Q9H009 215 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PDFQ9HBH1 243 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 OLAHQ9NV23 265 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 AIG1Q9NVV5 245 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TMEM45AQ9NWC5 275 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SMOXQ9NWM0 555 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 COMMD8Q9NX08 183 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 CMTM6Q9NX76 183 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 CD274Q9NZQ7 290 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ANAPC2Q9UJX6 822 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 GPR45Q9Y5Y3 372 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 NCF1BA6NI72 391 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 NCF1CA8MVU1 366 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 C9JVG2 144 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 E5RI56 91 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 MUSKO15146 869 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 CLOCKO15516 846 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ZFC3H1O60293 1989 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 TLR5O60602 858 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 GMNNO75496 209 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 GJB3O75712 270 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 LDLRP01130 860 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 S100BP04271 92 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 NCF1P14598 390 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 LPOP22079 712 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 ARL1P40616 181 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 SLC11A2P49281 568 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 GSK3BP49841 420 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 CCT8P50990 548 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 POLR2JP52435 117 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 DIO3P55073 304 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 NUP107P57740 925 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 EEFSECP57772 596 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 ERVK-8P63133 956 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 LIPEQ05469 1076 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 MERTKQ12866 999 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 FOXC1Q12948 553 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ATP6AP1Q15904 470 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 KCNA10Q16322 511 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PTPRNQ16849 979 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 GREB1Q4ZG55 1949 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ATP6AP1LQ52LC2 224 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PDCD4Q53EL6 469 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 FAM26DQ5JW98 314 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 FAM171A1Q5VUB5 890 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 UGT3A1Q6NUS8 523 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ANKRD12Q6UB98 2062 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ABRAXAS1Q6UWZ7 409 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 FRA10AC1Q70Z53 315 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PROSER1Q86XN7 944 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PTRH1Q86Y79 214 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 GPSM1Q86YR5 675 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 COLGALT2Q8IYK4 626 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ADGRG5Q8IZF4 528 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ABI1Q8IZP0 508 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TERB1Q8NA31 727 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PCSK9Q8NBP7 692 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 ATAD1Q8NBU5 361 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 DNAJB14Q8TBM8 379 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 CHD5Q8TDI0 1954 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 LZICQ8WZA0 190 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 FUBP1Q96AE4 644 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 TMEM125Q96AQ2 219 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 VPS33AQ96AX1 596 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SPATA17Q96L03 361 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 BIRC8Q96P09 236 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PSKH2Q96QS6 385 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TRIB3Q96RU7 358 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 GPR21Q99679 349 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 C1QTNF3Q9BXJ4 246 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 BRINP2Q9C0B6 783 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TUBB1Q9H4B7 451 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 DUS2Q9NX74 493 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 ZIM2Q9NZV7 527 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 CIDEBQ9UHD4 219 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PCTPQ9UKL6 214 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 OAZ3Q9UMX2 235 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PHF24Q9UPV7 400 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TIMM22Q9Y584 194 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PCDHA9Q9Y5H5 950 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 COMMD10Q9Y6G5 202 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 DNAH12Q6ZR08 3092 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 FAM234BA2RU67 622 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 FAM149AA5PLN7 773 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 ZNF701M0R085 212 aaPredicted RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 CDC7O00311 574 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 INSIG1O15503 277 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 B4GALT3O60512 393 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 ADAMTS4O75173 837 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 PKMP14618 531 aaKnown RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 CHRM3P20309 590 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 OXTRP30559 389 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 TTKP33981 857 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms