RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 IYDQ6PHW0 289 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 PAPD4Q6PIY7 484 aaKnown RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 PPP1R21Q6ZMI0 780 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 ZNF788Q6ZQV5 615 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 SLC16A12Q6ZSM3 486 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 MSANTD1Q6ZTZ1 278 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 TPRG1Q6ZUI0 275 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 RAPH1Q70E73 1250 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 MON1BQ7L1V2 547 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 SHFQ7M4L6 423 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 PIWIL3Q7Z3Z3 882 aaKnown RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 LDLRAD3Q86YD5 345 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 MFN1Q8IWA4 741 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 FBXO39Q8N4B4 442 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 CARNMT1Q8N4J0 409 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 CSNK2A3Q8NEV1 391 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 ENGASEQ8NFI3 743 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 TMEM174Q8WUU8 243 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 KCNE4Q8WWG9 221 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 TRIB2Q92519 343 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 APBB2Q92870 758 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 MR1Q95460 341 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 ERO1AQ96HE7 468 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 NEK1Q96PY6 1258 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 SMC6Q96SB8 1091 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 EGFL8Q99944 293 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 TMEM79Q9BSE2 394 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 ABHD6Q9BV23 337 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 TUBB2BQ9BVA1 445 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 POLDIP3Q9BY77 421 aaKnown RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 KCNN2Q9H2S1 579 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 RPAP3Q9H6T3 665 aaPredicted RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 CNOT10Q9H9A5 744 aaKnown RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 CLK4Q9HAZ1 481 aaKnown RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 TRPV4Q9HBA0 871 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 MMP25Q9NPA2 562 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 DDX43Q9NXZ2 648 aaKnown RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 OR6C3Q9NZP0 311 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 C6orf203Q9P0P8 240 aaPredicted RBP2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 SLC9A2Q9UBY0 812 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 SQORQ9Y6N5 450 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 AKNAQ7Z591 1439 aa2.99□□□□□ -1.93
MTHFD1-212ENST00000555858 A0A087WV48 116 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 A0A0B4J293 547 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 SMIM35A0A1B0GVV1 85 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 A0A1W2PPC1 479 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 HTR3EA5X5Y0 456 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 MANSC4A6NHS7 340 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 OR6C76A6NM76 312 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 TMCO5BA8MYB1 307 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 KDM4EB2RXH2 506 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 ZNF814B7Z6K7 855 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 MATN3O15232 486 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 NDUFS4O43181 175 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 LDB2O43679 373 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 TLR2O60603 784 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 FMO6PO60774 539 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 ATG13O75143 517 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 EGFP01133 1207 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 HSPA5P11021 654 aaKnown RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 SRCP12931 536 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 CASTP20810 708 aaKnown RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 GNLYP22749 145 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 DNASE1P24855 282 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 NMBRP28336 390 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 HNRNPH1P31943 449 aaKnown RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 HNF4AP41235 474 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 FASLGP48023 281 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 PTH2RP49190 550 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 RASSF2P50749 326 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 ELLP55199 621 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 TPD52P55327 224 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 PROK1P58294 105 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 SELENOVP59797 346 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 PPP2R2BQ00005 443 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 YWHAHQ04917 246 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 FOXM1Q08050 763 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 NFE2L1Q14494 772 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 MVPQ14764 893 aaKnown RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 DAZAP2Q15038 168 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 MEP1AQ16819 746 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 ZNF674Q2M3X9 581 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 TYSND1Q2T9J0 566 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 MYLK3Q32MK0 819 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 PPP6R3Q5H9R7 873 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 DCST1Q5T197 706 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 FRG2Q64ET8 278 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 PARM1Q6UWI2 310 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 ABRAXAS1Q6UWZ7 409 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 SPATA19Q7Z5L4 167 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 ERC1Q8IUD2 1116 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 DSELQ8IZU8 1212 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 SIX6OS1Q8N1H7 587 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 ARL10Q8N8L6 244 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 BOLLQ8N9W6 283 aaKnown RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 FAM98AQ8NCA5 519 aaKnown RBP2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 MOSPD2Q8NHP6 518 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 TAS1R2Q8TE23 839 aa2.98□□□□□ -1.93
MTHFD1-212ENST00000555858 GRK7Q8WTQ7 553 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms