RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SLFN11Q7Z7L1 901 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 ZNF354CQ86Y25 554 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 PLXDC1Q8IUK5 500 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 TP53INP2Q8IXH6 220 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 PGBD5Q8N414 524 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 SLC20A1Q8WUM9 679 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 SNRNP40Q96DI7 357 aaKnown RBP8.97□□□□□ -0.97
PRKCH-218ENST00000555628 CELF6Q96J87 481 aaKnown RBP8.97□□□□□ -0.97
PRKCH-218ENST00000555628 C5orf34Q96MH7 638 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 OR6C1Q96RD1 312 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 WDR24Q96S15 920 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 SMAD5Q99717 465 aaKnown RBP8.97□□□□□ -0.97
PRKCH-218ENST00000555628 HERPUD2Q9BSE4 406 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 SLC29A3Q9BZD2 475 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 ING2Q9H160 280 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 ABCG8Q9H221 673 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 VPS18Q9P253 973 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 CPNE7Q9UBL6 633 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 PADI1Q9ULC6 663 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 ZNF451Q9Y4E5 1061 aa8.97□□□□□ -0.97
PRKCH-218ENST00000555628 KIR2DS5A0A0G2JLQ3 304 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 A0A0G2JNG1 304 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 F8VZ95 297 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 KIR2DS3K7RE56 304 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 INPP4BO15327 924 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 CCP110O43303 1012 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 HNRNPRO43390 633 aaKnown RBP8.96□□□□□ -0.98
PRKCH-218ENST00000555628 KIF1CO43896 1103 aaKnown RBP8.96□□□□□ -0.98
PRKCH-218ENST00000555628 PALMO75781 387 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 F3P13726 295 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 LPOP22079 712 aaPredicted RBP8.96□□□□□ -0.98
PRKCH-218ENST00000555628 PTPN4P29074 926 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 CASP14P31944 242 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 HTR7P34969 479 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 FOXM1Q08050 763 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 IHHQ14623 411 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 RFTN1Q14699 578 aaPredicted RBP8.96□□□□□ -0.98
PRKCH-218ENST00000555628 KIR2DS5Q14953 304 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 MIIPQ5JXC2 388 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 PWWP2BQ6NUJ5 590 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 WDR59Q6PJI9 974 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 CYP4V2Q6ZWL3 525 aaPredicted RBP8.96□□□□□ -0.98
PRKCH-218ENST00000555628 MARK2Q7KZI7 788 aaKnown RBP8.96□□□□□ -0.98
PRKCH-218ENST00000555628 SYVN1Q86TM6 617 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 HPS6Q86YV9 775 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 TREML1Q86YW5 311 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 GALNT13Q8IUC8 556 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 GLIS1Q8NBF1 620 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 FDCSPQ8NFU4 85 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 PIH1D2Q8WWB5 315 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 SEC14L1Q92503 715 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 INPP5DQ92835 1189 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 SCAMP4Q969E2 229 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 SH3KBP1Q96B97 665 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 SCRN2Q96FV2 425 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 SLC41A2Q96JW4 573 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 PLEKHG4BQ96PX9 1271 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 SMIM14Q96QK8 99 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 MGME1Q9BQP7 344 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 GPR87Q9BY21 358 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 CATSPERBQ9H7T0 1116 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 ASF1BQ9NVP2 202 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 LNPEPQ9UIQ6 1025 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 NTNG1Q9Y2I2 539 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 PRKAB1Q9Y478 270 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 PCM1Q15154 2024 aa8.96□□□□□ -0.98
PRKCH-218ENST00000555628 ANKHD1Q8IWZ3 2542 aaKnown RBP8.96□□□□□ -0.98
PRKCH-218ENST00000555628 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 FER1L5A0AVI2 2057 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 SPTBP11277 2137 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 SEC16AO15027 2179 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 A0A1W2PQ67 120 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 SSU72P8A0A1W2PR75 194 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 ARGFXA6NJG6 315 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 E2F3O00716 465 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 CREB3O43889 395 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 FZD6O60353 706 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 DPM1O60762 260 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 LRCH4O75427 683 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 PGLSO95336 258 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 CPP00450 1065 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 UNGP13051 313 aaPredicted RBP8.95□□□□□ -0.98
PRKCH-218ENST00000555628 NELFEP18615 380 aaKnown RBP8.95□□□□□ -0.98
PRKCH-218ENST00000555628 ADH7P40394 386 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 GPR1P46091 355 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 CAPZBP47756 277 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 SCNN1BP51168 640 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 CLCNKAP51800 687 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 AIF1P55008 147 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 ITGA1P56199 1179 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 IL10RBQ08334 325 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 SLC10A7Q0GE19 358 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 TESK1Q15569 626 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 CA9Q16790 459 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 PLEKHN1Q494U1 663 aaPredicted RBP8.95□□□□□ -0.98
PRKCH-218ENST00000555628 KLHDC7AQ5VTJ3 777 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 FAM199XQ6PEV8 388 aaPredicted RBP8.95□□□□□ -0.98
PRKCH-218ENST00000555628 TMEM26Q6ZUK4 368 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 MSANTD4Q8NCY6 345 aa8.95□□□□□ -0.98
PRKCH-218ENST00000555628 SLC30A5Q8TAD4 765 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms