RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SPATA13Q96N96 652 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 NUDT22Q9BRQ3 303 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 RDH14Q9HBH5 336 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ARNT2Q9HBZ2 717 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 SMOXQ9NWM0 555 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
VRK1-204ENST00000555351 CPNE7Q9UBL6 633 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 PISDQ9UG56 409 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 UNC13CQ8NB66 2214 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ZNF106Q9H2Y7 1883 aaKnown RBP11.68□□□□□ -0.54
VRK1-204ENST00000555351 GLYATL1P3A0A0U1RQE8 302 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 C2orf81A6NN90 581 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 B4E171 279 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 K7ENP7 123 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 ERVH48-1M5A8F1 160 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 PYGMP11217 842 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 LPOP22079 712 aaPredicted RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 TSPAN7P41732 249 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 CHRNA4P43681 627 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 UBE2IP63279 158 aaKnown RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 CXADRP78310 365 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 DMPKQ09013 629 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 TMEM115Q12893 351 aaPredicted RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 GTF2H3Q13889 308 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 TAF1AQ15573 450 aaPredicted RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 INSCQ1MX18 579 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 KIF26BQ2KJY2 2108 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 DARS2Q6PI48 645 aaKnown RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 INO80CQ6PI98 192 aaPredicted RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 USP53Q70EK8 1073 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 JAMLQ86YT9 394 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 SLC25A41Q8N5S1 370 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 DDHD1Q8NEL9 900 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 BLOC1S5Q8TDH9 187 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 AHCYL2Q96HN2 611 aaKnown RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 NAF1Q96HR8 494 aaKnown RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 CCDC74BQ96LY2 380 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 TTC25Q96NG3 672 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 TAAR9Q96RI9 348 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 CCNL2Q96S94 520 aaPredicted RBP11.67□□□□□ -0.54
VRK1-204ENST00000555351 DDA1Q9BW61 102 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 ASPSCR1Q9BZE9 553 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 KLC4Q9NSK0 619 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 TMPRSS11EQ9UL52 423 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 KCNK6Q9Y257 313 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 PRKAB1Q9Y478 270 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 PTPRQQ9UMZ3 2332 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 BPTFQ12830 3046 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 CACNA1GO43497 2377 aa11.67□□□□□ -0.54
VRK1-204ENST00000555351 AGAP14A8MT82 685 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 STX7O15400 261 aaKnown RBP11.66□□□□□ -0.54
VRK1-204ENST00000555351 TOX3O15405 576 aaPredicted RBP11.66□□□□□ -0.54
VRK1-204ENST00000555351 KCNN4O15554 427 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 CRTAMO95727 393 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 SLC4A1P02730 911 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 HGFP14210 728 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
VRK1-204ENST00000555351 IDSP22304 550 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 CSF2RBP32927 897 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 CSTF2P33240 577 aaKnown RBP eCLIP11.66□□□□□ -0.54
VRK1-204ENST00000555351 GSDMDP57764 484 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 RAB15P59190 212 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 CFHR1Q03591 330 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 KLF1Q13351 362 aaPredicted RBP11.66□□□□□ -0.54
VRK1-204ENST00000555351 ARHGAP22Q7Z5H3 698 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 DTX1Q86Y01 620 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 PLXDC1Q8IUK5 500 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 ZNF547Q8IVP9 402 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 TEFMQ96QE5 360 aaKnown RBP11.66□□□□□ -0.54
VRK1-204ENST00000555351 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 FICDQ9BVA6 458 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 FRMD8P1Q9BZ68 369 aaPredicted RBP11.66□□□□□ -0.54
VRK1-204ENST00000555351 TSGA10Q9BZW7 698 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 BPIFA1Q9NP55 256 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 POT1Q9NUX5 634 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 SLC23A2Q9UGH3 650 aa11.66□□□□□ -0.54
VRK1-204ENST00000555351 MN1Q10571 1320 aaPredicted RBP11.65□□□□□ -0.54
VRK1-204ENST00000555351 PRAMEF33A0A0G2JMD5 474 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 MACROD2A1Z1Q3 448 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 C9orf172C9J069 976 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 GAPDHSO14556 408 aaPredicted RBP11.65□□□□□ -0.54
VRK1-204ENST00000555351 DDX3YO15523 660 aaKnown RBP11.65□□□□□ -0.54
VRK1-204ENST00000555351 PSMD3O43242 534 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 SNX2O60749 519 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 PRAMEF10O60809 474 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 AGTP01019 485 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 ANKRD34CP0C6C1 535 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.54
VRK1-204ENST00000555351 ITIH1P19827 911 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 PSMB4P28070 264 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 HADHAP40939 763 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 ETV5P41161 510 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 MSLNQ13421 630 aaPredicted RBP11.65□□□□□ -0.54
VRK1-204ENST00000555351 CHRNA6Q15825 494 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 PARP6Q2NL67 630 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 KHDC1Q4VXA5 237 aaKnown RBP11.65□□□□□ -0.54
VRK1-204ENST00000555351 FAM182AQ5T1J6 154 aa11.65□□□□□ -0.54
VRK1-204ENST00000555351 NKAIN2Q5VXU1 208 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms