RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CKAP5Q14008 2032 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 PTPRCP08575 1304 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 IGLV5-37A0A075B6J1 123 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 CLEC18AA5D8T8 446 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 H7C0S8 307 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 SLC16A5O15375 505 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZBTB43O43298 467 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF217O75362 1048 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 CLDN14O95500 239 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 MYBL1P10243 752 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 KCNA5P22460 613 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ITGB8P26012 769 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 CTSCP53634 463 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 POLGP54098 1239 aaPredicted RBP5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 PPP2R2BQ00005 443 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 TRAF3Q13114 568 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 MYBPHQ13203 477 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ALCAMQ13740 583 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 CCDC96Q2M329 555 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 FAM98BQ52LJ0 330 aaKnown RBP5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 KRTCAP3Q53RY4 240 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 KRT80Q6KB66 452 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 LDB1Q86U70 411 aaPredicted RBP5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 CEP97Q8IW35 865 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ADHFE1Q8IWW8 467 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 SLC5A8Q8N695 610 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 IQCF1Q8N6M8 205 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 CLEC18CQ8NCF0 446 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ACVR1CQ8NER5 493 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 HMGCLL1Q8TB92 370 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ELP5Q8TE02 316 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 PPP4R1Q8TF05 950 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF653Q96CK0 615 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF224Q9NZL3 707 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 RCC2Q9P258 522 aaKnown RBP5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 SIX4Q9UIU6 781 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 TSPYL4Q9UJ04 414 aa5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZHX1Q9UKY1 873 aaPredicted RBP5.31□□□□□ -1.56
CKS1BP1-201ENST00000555221 TRBC2A0A5B9 178 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 PROB1E7EW31 1015 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 FCGR1AP12314 374 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 S1PR1P21453 382 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 NMBRP28336 390 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 TMPOP42166 694 aaKnown RBP5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 SEC61A1P61619 476 aaKnown RBP5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF155Q12901 538 aaPredicted RBP5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 SNAPC1Q16533 368 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 CRY2Q49AN0 593 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 TRNP1Q6NT89 227 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 RHBDF2Q6PJF5 856 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 GALNT13Q8IUC8 556 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF34Q8IZ26 560 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 RNF113BQ8IZP6 322 aaKnown RBP5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 TDRD5Q8NAT2 981 aaKnown RBP5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF114Q8NC26 417 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 OR5R1Q8NH85 324 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 TMED6Q8WW62 240 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 PIGTQ969N2 578 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 SCMH1Q96GD3 660 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 CAMK1GQ96NX5 476 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 GFI1Q99684 422 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 TMEM204Q9BSN7 226 aa5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 CRNNQ9UBG3 495 aaPredicted RBP5.3□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF541Q9H0D2 1346 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 A8MXE2 369 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 TMEM189-UBE2V1I3L0A0 370 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 INO80B-WBP1J3KQ70 363 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 J3QR06 171 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 MID1O15344 667 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 PRAMEF11O60813 436 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 KDM4BO94953 1096 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZWINTO95229 277 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 BCL10O95999 233 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 AFPP02771 609 aaKnown RBP5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 UBE2V1Q13404 147 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 IL11RAQ14626 422 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 NFATC4Q14934 902 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 CBWD6Q4V339 395 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 SETMARQ53H47 684 aaPredicted RBP5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 CBWD3Q5JTY5 395 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 DENND5BQ6ZUT9 1274 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF534Q76KX8 674 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 PLPPR4Q7Z2D5 763 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 KRT77Q7Z794 578 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 MAP7D3Q8IWC1 876 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 AFAP1Q8N556 730 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 OR10S1Q8NGN2 331 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 B4GALNT2Q8NHY0 566 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 SCARB1Q8WTV0 552 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF385AQ96PM9 386 aaKnown RBP5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 NEK1Q96PY6 1258 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 PPIL3Q9H2H8 161 aaKnown RBP5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 ERVMER34-1Q9H9K5 563 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 OCIAD1Q9NX40 245 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 GIMAP2Q9UG22 337 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 IL17BQ9UHF5 180 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms