RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ITGA9Q13797 1035 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 SEMA3AQ14563 771 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 ZRANB3Q5FWF4 1079 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 TMEM220Q6QAJ8 160 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 FAM83HQ6ZRV2 1179 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-214ENST00000554928 ZNF761Q86XN6 746 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-214ENST00000554928 TRAPPC5Q8IUR0 188 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 NXPE1Q8N323 547 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 SDR16C5Q8N3Y7 309 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 ARL14Q8N4G2 192 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 Q8N9G6 341 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-214ENST00000554928 SCG3Q8WXD2 468 aaKnown RBP12.18□□□□□ -0.46
SYNE2-214ENST00000554928 HDAC10Q969S8 669 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 LRRC45Q96CN5 670 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 SGF29Q96ES7 293 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 RANBP9Q96S59 729 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 CCDC3Q9BQI4 270 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 RMI1Q9H9A7 625 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 PRDM8Q9NQV8 689 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 KLC4Q9NSK0 619 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 CRLS1Q9UJA2 301 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 APPL1Q9UKG1 709 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 ANGPTL2Q9UKU9 493 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 PRSS21Q9Y6M0 314 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 ZNF106Q9H2Y7 1883 aaKnown RBP12.18□□□□□ -0.46
SYNE2-214ENST00000554928 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 FRYQ5TBA9 3013 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 GOLGA6L10A0A0M3HER8 536 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 A0A1W2PQM1 296 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 HEATR9A2RTY3 570 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 H7C0S8 307 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 PPM1DO15297 605 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 VEGFDO43915 354 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 GOT2P00505 430 aaKnown RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 ZNF7P17097 686 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 ITGALP20701 1170 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 ADRA1DP25100 572 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 IVDP26440 423 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 NMBRP28336 390 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 PBLDP30039 288 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 AKT1P31749 480 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 HADHAP40939 763 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 DUSP3P51452 185 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 CCL7P80098 99 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 PDE1BQ01064 536 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 ACVR1Q04771 509 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 ILKQ13418 452 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 DBN1Q16643 649 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 INSCQ1MX18 579 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 LDLRAP1Q5SW96 308 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 CDCP2Q5VXM1 449 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 LRRC8BQ6P9F7 803 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 C4orf22Q6V702 233 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 SNX20Q7Z614 316 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 LRRTM4Q86VH4 590 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 SERPINA9Q86WD7 417 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 LILRA3Q8N6C8 439 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 NAT8LQ8N9F0 302 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 MAPK15Q8TD08 544 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 SLC37A2Q8TED4 501 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 C16orf45Q96MC5 204 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 PWWP2AQ96N64 755 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 TRIM51Q9BSJ1 452 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 MARCH4Q9P2E8 410 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 PCYOX1Q9UHG3 505 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
SYNE2-214ENST00000554928 COL27A1Q8IZC6 1860 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-214ENST00000554928 FAM221BA6H8Z2 402 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 C1QTNF9BB2RNN3 333 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 KMOO15229 486 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 TTI1O43156 1089 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 B4GAT1O43505 415 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 BANF1O75531 89 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 POP7O75817 140 aaKnown RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 MT-CO3P00414 261 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 GP1BAP07359 652 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 F7P08709 466 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 C1QTNF9P0C862 333 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 BRAFP15056 766 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 MSH3P20585 1137 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 ACRV1P26436 265 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 ARNTP27540 789 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 CASQ1P31415 396 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 RPIAP49247 311 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 PDX1P52945 283 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 DRG2P55039 364 aaKnown RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 FOXK2Q01167 660 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 C2orf54Q08AI8 447 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 TARDBPQ13148 414 aaKnown RBP eCLIP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 PTK6Q13882 451 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 LRP8Q14114 963 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 NFE2L1Q14494 772 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 PPP1R7Q15435 360 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 PCID2Q5JVF3 399 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 FNBP1LQ5T0N5 605 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 RNASEH2BQ5TBB1 312 aaKnown RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 TAS2R42Q7RTR8 314 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms