RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ZAR1LA6NP61 321 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 C10orf142B7Z368 130 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 F5H5T6 163 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 M0QYT0 321 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PES1O00541 588 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CDX4O14627 284 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 AP5Z1O43299 807 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 TIMM44O43615 452 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PCDHGA12O60330 932 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 GFPT2O94808 682 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 LSM8O95777 96 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 APOEP02649 317 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 DLDP09622 509 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SBK3P0C264 359 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 EGR2P11161 476 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 POLR2EP19388 210 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CDK11BP21127 795 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FDXRP22570 491 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CD6P30203 668 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 HOXD12P35452 270 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 KRT9P35527 623 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CSKP41240 450 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 DPP6P42658 865 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 MATKP42679 507 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SULT1E1P49888 294 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SLC16A1P53985 500 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 GSCP56915 257 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 RPS14P62263 151 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 YWHAZP63104 245 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 IRX4P78413 519 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FMO1Q01740 532 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 MYL5Q02045 173 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF33AQ06730 810 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PTP4A2Q12974 167 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 TARDBPQ13148 414 aaKnown RBP eCLIP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 NME3Q13232 169 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CDH18Q13634 790 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 BYSLQ13895 437 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 E2F5Q15329 346 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PCBP2Q15366 365 aaKnown RBP eCLIP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SYCP1Q15431 976 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PLEKHG6Q3KR16 790 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 C5orf22Q49AR2 442 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 C2CD6Q53TS8 623 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 EFHC1Q5JVL4 640 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SPDYCQ5MJ68 293 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ABHD17BQ5VST6 288 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 TAF3Q5VWG9 929 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 NAA35Q5VZE5 725 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 OR6B2Q6IFH4 312 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FBXL22Q6P050 247 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SASS6Q6UVJ0 657 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 MMS22LQ6ZRQ5 1243 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 C14orf80Q86SX3 495 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CACUL1Q86Y37 369 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ZDHHC17Q8IUH5 632 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF683Q8IZ20 524 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 APCDD1Q8J025 514 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CFAP52Q8N1V2 620 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CARNMT1Q8N4J0 409 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 DEFB119Q8N690 84 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FITM2Q8N6M3 262 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF366Q8N895 744 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ATP6V0D2Q8N8Y2 350 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 TMEM35BQ8NCS4 154 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 OR52K2Q8NGK3 314 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PIGKQ92643 395 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 IGSF8Q969P0 613 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 NT5C3BQ969T7 300 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 C18orf8Q96DM3 657 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ALG14Q96F25 216 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PGAP3Q96FM1 320 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SIPA1Q96FS4 1042 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF419Q96HQ0 510 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 BTN2A3PQ96KV6 586 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ERGIC2Q96RQ1 377 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 BPIFA3Q9BQP9 254 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FUCA2Q9BTY2 467 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PRDM16Q9HAZ2 1276 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PRSS16Q9NQE7 514 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FSCN3Q9NQT6 498 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ITM2CQ9NQX7 267 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FAM207AQ9NSI2 230 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 DDIT4Q9NX09 232 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ARHGEF38Q9NXL2 777 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 WSB2Q9NYS7 404 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CDYLQ9Y232 598 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 DAAM1Q9Y4D1 1078 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 CEP83Q9Y592 693 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PCDHGA9Q9Y5G4 932 aaKnown RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PCDHGA8Q9Y5G5 932 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PCDHGA7Q9Y5G6 932 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PCDHGA6Q9Y5G7 932 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 PCDHGA3Q9Y5H0 932 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 SNX10Q9Y5X0 201 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ARHGEF17Q96PE2 2063 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ACACBO00763 2458 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TP53BP1Q12888 1972 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SYNJ2BP-COX16A0A087WUM0 186 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms