RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 STK25O00506 426 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TOR1BO14657 336 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 KPNA5O15131 536 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 PHGDHO43175 533 aaKnown RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 DCXO43602 365 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 VEGFDO43915 354 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 MAGEC1O60732 1142 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 NIPSNAP2O75323 286 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 SPAG7O75391 227 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 KLHL2O95198 593 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 SEMA4FO95754 770 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 FTH1P02794 183 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 HOXC4P09017 264 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 LTA4HP09960 611 aaKnown RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3HP0C7X1 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 DHRS4L1P0CG22 281 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 ATP1B2P14415 290 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 CHN1P15882 459 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 SAT1P21673 171 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CD6P30203 668 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 ACSL1P33121 698 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CA5AP35218 305 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 RPA3P35244 121 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 PRLHRP49683 370 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CCR5P51681 352 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CLCN7P51798 805 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TIAL1Q01085 375 aaKnown RBP eCLIP7.56□□□□□ -1.2
TDP1-209ENST00000554180 MTAPQ13126 283 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 MPP2Q14168 576 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 FGL2Q14314 439 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 IRF4Q15306 451 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 SEPT7Q16181 437 aaKnown RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 FAM83EQ2M2I3 478 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 WSCD2Q2TBF2 565 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CCDC153Q494R4 210 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 BCL7AQ4VC05 210 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 PPM1JQ5JR12 505 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 AGAP9Q5VTM2 703 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3GQ6DHY5 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3CQ6IPX1 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 LRRC8EQ6NSJ5 796 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 KLC3Q6P597 504 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3Q8IZP1 549 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 CENPLQ8N0S6 344 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 NKAPQ8N5F7 415 aaKnown RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 PNPLA1Q8N8W4 532 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TP53I13Q8NBR0 393 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 FLCNQ8NFG4 579 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CD200R1Q8TD46 325 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TCP10LQ8TDR4 215 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CENPTQ96BT3 561 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 COX14Q96I36 57 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 HIC2Q96JB3 615 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 HHIPQ96QV1 700 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 GPR21Q99679 349 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 BOCQ9BWV1 1114 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 C1QTNF1Q9BXJ1 281 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TEX101Q9BY14 249 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 SLC17A9Q9BYT1 436 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 WDR26Q9H7D7 661 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TRIM39Q9HCM9 518 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 SPATS2LQ9NUQ6 558 aaKnown RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 INTS9Q9NV88 658 aaKnown RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 C2orf42Q9NWW7 574 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 WSB2Q9NYS7 404 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 CNOT6Q9ULM6 557 aaKnown RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 DHRS7Q9Y394 339 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 ATG2BQ96BY7 2078 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 ZDBF2Q9HCK1 2354 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 SRRM3A6NNA2 597 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 POLR3GO15318 223 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 BIRC5O15392 142 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 PLIN3O60664 434 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ASMTLO95671 621 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 PAK4O96013 591 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 RBP1P09455 135 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CBSLP0DN79 551 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 MYCLP1P12525 358 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 ENO3P13929 434 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 AOC1P19801 751 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CHRM3P20309 590 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 HNRNPA2B1P22626 353 aaKnown RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 DGKAP23743 735 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CBSP35520 551 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 MDH1P40925 334 aaKnown RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 ETV4P43268 484 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CXCL12P48061 93 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 RGS4P49798 205 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ATP1A2P50993 1020 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ATP6V0D1P61421 351 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 PPP2CBP62714 309 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 PPP2CAP67775 309 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CDK3Q00526 305 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 IRF9Q00978 393 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 IL9RQ01113 521 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 TMEM115Q12893 351 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 GTF2H3Q13889 308 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ZNF460Q14592 562 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ACAP2Q15057 778 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 TTLL9Q3SXZ7 439 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms