RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ZNF106Q9H2Y7 1883 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 ENO4A6NNW6 628 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 FZD6O60353 706 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 EEDO75530 441 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 TMCC1O94876 653 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 GPIP06744 558 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 UMPSP11172 480 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 CAPN3P20807 821 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 IL10P22301 178 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 GSTT1P30711 240 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 FOXA1P55317 472 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 WDR5P61964 334 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 DEFB103AP81534 67 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 ARF5P84085 180 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 RALGDSQ12967 914 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 PCBP2Q15366 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 CRY1Q16526 586 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 CNPY1Q3B7I2 92 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 TMEM240Q5SV17 173 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 RNF219Q5W0B1 726 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 BORAQ6PGQ7 559 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 RNF165Q6ZSG1 346 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 ERMP1Q7Z2K6 904 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 PTRH1Q86Y79 214 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SLC15A3Q8IY34 581 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SLCO4A1Q96BD0 722 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 NSUN5Q96P11 429 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SH3GL3Q99963 347 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 HGH1Q9BTY7 390 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 P2RY12Q9H244 342 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SLC24A3Q9HC58 644 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SLC52A3Q9NQ40 469 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 DHRS7Q9Y394 339 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 PLXNA4Q9HCM2 1894 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 KIAA1671Q9BY89 1806 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 ABHD14A-ACY1A0A1B0GW23 586 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 FXYD1O00168 92 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 CDC7O00311 574 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 PPP6CO00743 305 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 NME4O00746 187 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 PRMT5O14744 637 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-205ENST00000553474 BAIAP3O94812 1187 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 SMIM18P0DKX4 95 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 HDCP19113 662 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 MSH3P20585 1137 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 RPS3P23396 243 aaKnown RBP eCLIP12.78□□□□□ -0.364e-7■■■□□ 16.5
SHMT2-205ENST00000553474 SLC6A2P23975 617 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 PSMA4P25789 261 aaKnown RBP12.78□□□□□ -0.36
SHMT2-205ENST00000553474 GATMP50440 423 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 POLE2P56282 527 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 TRAF2Q12933 501 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 GRB7Q14451 532 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 TAF12Q16514 161 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 SMU1Q2TAY7 513 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 LYPLAL1Q5VWZ2 237 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 KIAA1841Q6NSI8 718 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 PSAPL1Q6NUJ1 521 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 PPP4R4Q6NUP7 873 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 GPRIN3Q6ZVF9 776 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 TAS1R1Q7RTX1 841 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 TMEM173Q86WV6 379 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-205ENST00000553474 GALNT13Q8IUC8 556 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 PIANPQ8IYJ0 282 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 CARNMT1Q8N4J0 409 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 HJURPQ8NCD3 748 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-205ENST00000553474 HAUS8Q9BT25 410 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 SEMA4BQ9NPR2 832 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-205ENST00000553474 UBAP1Q9NZ09 502 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 IL17CQ9P0M4 197 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 CXXC1Q9P0U4 656 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-205ENST00000553474 THEGQ9P2T0 379 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 SUN2Q9UH99 717 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 FKBPLQ9UIM3 349 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 LZTS1Q9Y250 596 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 ZNF711Q9Y462 761 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 SNX13Q9Y5W8 968 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 SLC30A1Q9Y6M5 507 aa12.78□□□□□ -0.36
SHMT2-205ENST00000553474 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.77□□□□□ -0.36
SHMT2-205ENST00000553474 FAM234BA2RU67 622 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 NPEPPSL1A6NEC2 478 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 NT5C1B-RDH14C9J2C7 533 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 E2F3O00716 465 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 MAP3K13O43283 966 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 CD160O95971 181 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 MT-CO1P00395 513 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 LINC00032P0C843 101 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 PCSK2P16519 638 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 CHRM3P20309 590 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 GRIA3P42263 894 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 CSNK1DP48730 415 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 NR1H2P55055 460 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 EEFSECP57772 596 aaKnown RBP12.77□□□□□ -0.36
SHMT2-205ENST00000553474 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.36
SHMT2-205ENST00000553474 TGFBIQ15582 683 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 VPS26BQ4G0F5 336 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms