RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CCNI2Q6ZMN8 369 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 SFTPA2Q8IWL1 248 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 NAGSQ8N159 534 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 NXPE1Q8N323 547 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 CDKN2AIPNLQ96HQ2 116 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 ZNF514Q96K75 400 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 DEPDC7Q96QD5 511 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 COPS8Q99627 209 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 DDX47Q9H0S4 455 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 FAM96AQ9H5X1 160 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 LRIT1Q9P2V4 623 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 TCAF1Q9Y4C2 921 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 RNF215Q9Y6U7 377 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 FAM221BA6H8Z2 402 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 MROH6A6NGR9 719 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 OR2AG2A6NM03 316 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 PDZK1P1A8MUH7 402 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 CASQ1P31415 396 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 CLCNKAP51800 687 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 PRAMEP78395 509 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 TSTD2Q5T7W7 516 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 TMEM220Q6QAJ8 160 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 RBM44Q6ZP01 1051 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 DET1Q7L5Y6 550 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 CCNJLQ8IV13 435 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 ARL14Q8N4G2 192 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 RASGEF1AQ8N9B8 481 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 Q8N9G6 341 aaPredicted RBP18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 AVL9Q8NBF6 648 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 PATE1Q8WXA2 126 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 RUNDC3BQ96NL0 473 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 IL22Q9GZX6 179 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 RNF14Q9UBS8 474 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 TBC1D29Q9UFV1 150 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 RIMKLBQ9ULI2 386 aa18.21■□□□□ 0.51
PRPF40B-216ENST00000552301 PLXNB3Q9ULL4 1909 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 OR5K4A6NMS3 321 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 KCNJ13O60928 360 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 TCEA3O75764 348 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 RPLP0P05388 317 aaKnown RBP18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 F3P13726 295 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 PNLIPP16233 465 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 PBLDP30039 288 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 CA5AP35218 305 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 NPY2RP49146 381 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 PPM1FP49593 454 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 CTSCP53634 463 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 TARDBPQ13148 414 aaKnown RBP eCLIP18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 KCNJ11Q14654 390 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 KCTD19Q17RG1 926 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 PCID2Q5JVF3 399 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 FNBP1LQ5T0N5 605 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 LRRC8BQ6P9F7 803 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 AFTPHQ6ULP2 937 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 UNQ6494/PRO21346Q6UXR6 183 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 AMZ2Q86W34 360 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 MARCH9Q86YJ5 346 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 CREG2Q8IUH2 290 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 ZNF547Q8IVP9 402 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 SLC37A2Q8TED4 501 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 PEX13Q92968 403 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 GFM1Q96RP9 751 aaKnown RBP18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 TTC1Q99614 292 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 ZMYND15Q9H091 742 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 ZDHHC3Q9NYG2 299 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 ASIC3Q9UHC3 531 aa18.2■□□□□ 0.5
PRPF40B-216ENST00000552301 TRBV23OR9-2A0A075B6M9 112 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 KIR2DS5A0A0G2JLQ3 304 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 A0A0G2JNG1 304 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 AGAP14A8MT82 685 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 KIR2DS3K7RE56 304 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 CSO75390 466 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 POP7O75817 140 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 IDSP22304 550 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 ACRV1P26436 265 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 MAGEA6P43360 314 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 ARSDP51689 593 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 ETF1P62495 437 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 KIR2DS5Q14953 304 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 SEPT7Q16181 437 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 CDCP2Q5VXM1 449 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 SPRED1Q7Z699 444 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 SLC9B2Q86UD5 537 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 SERPINA9Q86WD7 417 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 C17orf82Q86X59 251 aaPredicted RBP18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 TRIM48Q8IWZ4 208 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 KLHL7Q8IXQ5 586 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 CACTIN-AS1Q8N1I8 211 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 SFRP1Q8N474 314 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 DCBLD1Q8N8Z6 715 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 OR6P1Q8NGX9 317 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 HDAC10Q969S8 669 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 LRRN3Q9H3W5 708 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 PRDM8Q9NQV8 689 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 SLC23A2Q9UGH3 650 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 RABGEF1Q9UJ41 708 aa18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 DNMT3AQ9Y6K1 912 aaPredicted RBP18.19■□□□□ 0.5
PRPF40B-216ENST00000552301 TRBV5-4A0A0C4DH59 114 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 TCRBV7S3A2A0A539 114 aa18.18■□□□□ 0.5
PRPF40B-216ENST00000552301 CCDC162PA2VCL2 907 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms