RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LEMD2Q8NC56 503 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SIMC1Q8NDZ2 872 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MCPH1Q8NEM0 835 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ZMIZ2Q8NF64 920 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC148Q8NFR7 591 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 KCNG4Q8TDN1 519 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ASB12Q8WXK4 309 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 RFKQ969G6 155 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SKA1Q96BD8 255 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CTHRC1Q96CG8 243 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 HVCN1Q96D96 273 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF503Q96F45 646 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 LMLNQ96KR4 655 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CNOT6LQ96LI5 555 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 UROC1Q96N76 676 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PRR25Q96S07 402 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CYP2S1Q96SQ9 504 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MECRQ9BV79 373 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 FGFBP2Q9BYJ0 223 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 GPR88Q9GZN0 384 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ST6GALNAC4Q9H4F1 302 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 TASP1Q9H6P5 420 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 C8orf33Q9H7E9 229 aaPredicted RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ECT2Q9H8V3 914 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PRDM16Q9HAZ2 1276 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 USP29Q9HBJ7 922 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CD93Q9NPY3 652 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 G6PC2Q9NQR9 355 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 DUSP22Q9NRW4 184 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 VPS45Q9NRW7 570 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 RASSF1Q9NS23 344 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 GKN1Q9NS71 199 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SERTAD4Q9NUC0 356 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 KCND3Q9UK17 655 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 RAB21Q9UL25 225 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SUFUQ9UMX1 484 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 NDRG2Q9UN36 371 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PCDHA12Q9UN75 941 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SLC12A4Q9UP95 1085 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 TMEM98Q9Y2Y6 226 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 DNHD1Q96M86 4753 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ANKRD17O75179 2603 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PIEZO2Q9H5I5 2752 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PTPRDP23468 1912 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 PLXNB3Q9ULL4 1909 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 MYH15Q9Y2K3 1946 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 PTPRJQ12913 1337 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CSMD1Q96PZ7 3565 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 LOC105369274A0A096LPK9 316 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 LOC102723532A0A0G2JNH3 316 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GXYLT2A0PJZ3 443 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 FRMD3A2A2Y4 597 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CLEC18AA5D8T8 446 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM8BA6NDV4 472 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 OR6C75A6NL08 312 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 TTC34A8MYJ7 566 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 VWC2LB2RUY7 222 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ANKRD63C9JTQ0 380 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 E9PMD0 336 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SGK1O00141 431 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 NKX2-8O15522 239 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 HNRNPRO43390 633 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SUV39H1O43463 412 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CCNT1O60563 726 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 TSPAN3O60637 253 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 USO1O60763 962 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ERLIN2O94905 339 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 TJP3O95049 919 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 IGLV3-19P01714 112 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 EBLN1P0CF75 366 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 TMIGD3P0DMS9 266 aaPredicted RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CXCL8P10145 99 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 JUPP14923 745 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ELF1P32519 619 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GRIA3P42263 894 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 EFNA5P52803 228 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 EEFSECP57772 596 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SLC7A9P82251 487 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 MRPS35P82673 323 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 DGCR2P98153 550 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 GTF2BQ00403 316 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 DEUP1Q05D60 604 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.46□□□□□ -2.022e-6■■□□□ 14.4
CPSF6-207ENST00000551516 EFEMP1Q12805 493 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 PDCLQ13371 301 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 PRPF4BQ13523 1007 aaKnown RBP2.46□□□□□ -2.02
CPSF6-207ENST00000551516 DMC1Q14565 340 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SHBQ15464 509 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CDSNQ15517 529 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 MAPK6Q16659 721 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CYP1B1Q16678 543 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SOWAHAQ2M3V2 549 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 ITPRIPL2Q3MIP1 535 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 DCAF4L1Q3SXM0 396 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 CFAP221Q4G0U5 840 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 PCID2Q5JVF3 399 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 MIIPQ5JXC2 388 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 SPDYCQ5MJ68 293 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 LIN9Q5TKA1 542 aa2.46□□□□□ -2.02
CPSF6-207ENST00000551516 C9orf57Q5W0N0 161 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms