RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
SNRPF-203ENST00000551316 UBA2Q9UBT2 640 aaPredicted RBP13.17□□□□□ -0.3
SNRPF-203ENST00000551316 STAP1Q9ULZ2 295 aa13.17□□□□□ -0.3
SNRPF-203ENST00000551316 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
SNRPF-203ENST00000551316 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 JCHAINP01591 159 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 AGAP20933 346 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 SYT1P21579 422 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 SOX8P57073 446 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
SNRPF-203ENST00000551316 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
SNRPF-203ENST00000551316 CLEC9AQ6UXN8 241 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 TBC1D31Q96DN5 1066 aa13.16□□□□□ -0.3
SNRPF-203ENST00000551316 CNOT6Q9ULM6 557 aaKnown RBP13.16□□□□□ -0.3
SNRPF-203ENST00000551316 ZNHIT1O43257 154 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 MED7O43513 233 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 ASMTLO95671 621 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 HEXAP06865 529 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 MEOX1P50221 254 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 GSDMDP57764 484 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 TUBB4BP68371 445 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 ATP11AP98196 1134 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 APBA1Q02410 837 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 ACY1Q03154 408 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 DPTQ07507 201 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 TUBB2AQ13885 445 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 GRM3Q14832 879 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-203ENST00000551316 ZNF648Q5T619 568 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-203ENST00000551316 TMEM207Q6UWW9 146 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 D2HGDHQ8N465 521 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 EMC1Q8N766 993 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
SNRPF-203ENST00000551316 GPR150Q8NGU9 434 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 TUBB2BQ9BVA1 445 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 OSGEPL1Q9H4B0 414 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 ARFGAP3Q9NP61 516 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 EPHA6Q9UF33 1036 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 SLC23A2Q9UGH3 650 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 MEGF8Q7Z7M0 2845 aa13.15□□□□□ -0.3
SNRPF-203ENST00000551316 CETN3O15182 167 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 SLC16A3O15427 465 aaKnown RBP13.14□□□□□ -0.31
SNRPF-203ENST00000551316 SLCO2B1O94956 709 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 VIPP01282 170 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 KLK3P07288 261 aaPredicted RBP13.14□□□□□ -0.31
SNRPF-203ENST00000551316 UMODP07911 640 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 XRCC1P18887 633 aaPredicted RBP13.14□□□□□ -0.31
SNRPF-203ENST00000551316 BCL2L1Q07817 233 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 FAM102AQ5T9C2 384 aaPredicted RBP13.14□□□□□ -0.31
SNRPF-203ENST00000551316 MTFR2Q6P444 385 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 OR1L3Q8NH93 324 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 AP2M1Q96CW1 435 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 CLIP3Q96DZ5 547 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 ZDHHC12Q96GR4 267 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 FER1L6-AS2Q96M78 137 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 MESP1Q9BRJ9 268 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 NDC1Q9BTX1 674 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 TLR10Q9BXR5 811 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 SLC6A20Q9NP91 592 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 KCND1Q9NSA2 647 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 PCDHGC4Q9Y5F7 938 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
SNRPF-203ENST00000551316 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 FADS2P1A8MWK0 482 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 CTPS1P17812 591 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 TLR1Q15399 786 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 CDO1Q16878 200 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 LONRF1Q17RB8 773 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 FCRL6Q6DN72 434 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 CYB5D1Q6P9G0 228 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 ARHGAP36Q6ZRI8 547 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 KRTAP1-3Q8IUG1 177 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 PAF1Q8N7H5 531 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 UBXN4Q92575 508 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-203ENST00000551316 WDR24Q96S15 920 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 SLC40A1Q9NP59 571 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 KLC4Q9NSK0 619 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 ZNF358Q9NW07 568 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
SNRPF-203ENST00000551316 WASH4PA8MWX3 477 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 SLC19A2O60779 497 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 PRAMEF11O60813 436 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 LY6G6DO95868 133 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 CPP00450 1065 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 PNMA6AP0CW24 399 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 SLC2A4P14672 509 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 CSNK1DP48730 415 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 PMP22Q01453 160 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 TRAF2Q12933 501 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 SLC9A5Q14940 896 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 RPUSD3Q6P087 351 aaKnown RBP13.12□□□□□ -0.31
SNRPF-203ENST00000551316 LINC00696Q6ZRV3 163 aa13.12□□□□□ -0.31
SNRPF-203ENST00000551316 TRIM48Q8IWZ4 208 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms