RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 CCNJLQ8IV13 435 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 ZNF567Q8N184 647 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 TTC30BQ8N4P2 665 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 PAF1Q8N7H5 531 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 OR56A4Q8NGH8 313 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 ACTL9Q8TC94 416 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 TMEM159Q96B96 161 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 SCARF2Q96GP6 870 aaPredicted RBP6.82□□□□□ -1.32
CBX5-204ENST00000550411 RBM41Q96IZ5 413 aaKnown RBP6.82□□□□□ -1.32
CBX5-204ENST00000550411 FAM118BQ9BPY3 351 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 TMEM168Q9H0V1 697 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 ACBD3Q9H3P7 528 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 STARD5Q9NSY2 213 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 IMPACTQ9P2X3 320 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 NFKBIL1Q9UBC1 381 aaPredicted RBP6.82□□□□□ -1.32
CBX5-204ENST00000550411 APPL1Q9UKG1 709 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 TMPRSS11EQ9UL52 423 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 PACSIN2Q9UNF0 486 aaPredicted RBP6.82□□□□□ -1.32
CBX5-204ENST00000550411 ZNF232Q9UNY5 417 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 SLC17A4Q9Y2C5 497 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 PLEKHM1Q9Y4G2 1056 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 CNTRLQ7Z7A1 2325 aa6.82□□□□□ -1.32
CBX5-204ENST00000550411 HEATR5BQ9P2D3 2071 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 USP9YO00507 2555 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 PRAMEF33A0A0G2JMD5 474 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 C1orf232A0A0U1RR37 186 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 MACROD2A1Z1Q3 448 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 ANKRD66B4E2M5 251 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 CACNB4O00305 520 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 SUV39H1O43463 412 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 PRAMEF10O60809 474 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 PPFIA2O75334 1257 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 PMPCBO75439 489 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 NDST3O95803 873 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 IVLP07476 585 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 FAM87AP0C7U9 286 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 ITGB6P18564 788 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 KELP23276 732 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 CD82P27701 267 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 CA5AP35218 305 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 SPINT3P49223 89 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 WNT3AP56704 352 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 OTUD4Q01804 1114 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 ZFP36L1Q07352 338 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 KLF1Q13351 362 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 ARHGEF7Q14155 803 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 PCSK7Q16549 785 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 C11orf91Q3C1V1 193 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 KHDC1Q4VXA5 237 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 C14orf28Q4W4Y0 310 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 CERCAMQ5T4B2 595 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 PHF19Q5T6S3 580 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 RAET1GQ6H3X3 334 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 MICALCLQ6ZW33 695 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 SPRED1Q7Z699 444 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 TAF8Q7Z7C8 310 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 VASH2Q86V25 355 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 ZC3H18Q86VM9 953 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 C17orf82Q86X59 251 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 ZFAND4Q86XD8 727 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 CCDC50Q8IVM0 306 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 KLHDC8BQ8IXV7 354 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 RCOR2Q8IZ40 523 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 Q8N9G6 341 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 GPR26Q8NDV2 337 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 FAM46DQ8NEK8 389 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 TFB1MQ8WVM0 346 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 PATE1Q8WXA2 126 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 USP7Q93009 1102 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 AP2M1Q96CW1 435 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 MRGPRX2Q96LB1 330 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 CMKLR1Q99788 373 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 MLPHQ9BV36 600 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 RIOK2Q9BVS4 552 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 OSBPL8Q9BZF1 889 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 GBA3Q9H227 469 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 SUDS3Q9H7L9 328 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 CYP4F12Q9HCS2 524 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 LUC7LQ9NQ29 371 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 PHPT1Q9NRX4 125 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 UBP1Q9NZI7 540 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 LRIT1Q9P2V4 623 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 SUFUQ9UMX1 484 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 R3HDM2Q9Y2K5 976 aaKnown RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 ZNF711Q9Y462 761 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 RNF215Q9Y6U7 377 aa6.81□□□□□ -1.32
CBX5-204ENST00000550411 USP9XQ93008 2570 aaPredicted RBP6.81□□□□□ -1.32
CBX5-204ENST00000550411 LOC285095A0A1B0GVY8 99 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 CCDC66A2RUB6 948 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 PRR19A6NJB7 356 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 HACD1B0YJ81 288 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 B4DGG1 531 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 C9orf172C9J069 976 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 GAPDHSO14556 408 aaPredicted RBP6.8□□□□□ -1.32
CBX5-204ENST00000550411 EIF1AYO14602 144 aaKnown RBP6.8□□□□□ -1.32
CBX5-204ENST00000550411 GPR39O43194 453 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 NUDT21O43809 227 aaKnown RBP6.8□□□□□ -1.32
CBX5-204ENST00000550411 CPNE6O95741 557 aa6.8□□□□□ -1.32
CBX5-204ENST00000550411 EML2O95834 649 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms