RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CCR10P46092 362 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 SPINT3P49223 89 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 ZBED6P86452 979 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 MC2RQ01718 297 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 CLCA4Q14CN2 919 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 PDK2Q15119 407 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 IGFBP7Q16270 282 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 ANKRD20A8PQ5CZ79 823 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 ANKS6Q68DC2 871 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 ALKBH5Q6P6C2 394 aaKnown RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 IYDQ6PHW0 289 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 CEACAM20Q6UY09 585 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 CHST15Q7LFX5 561 aaPredicted RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 ARHGAP22Q7Z5H3 698 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 PHYKPLQ8IUZ5 450 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 MAP7D3Q8IWC1 876 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 CACNA2D3Q8IZS8 1091 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 NLGN4XQ8N0W4 816 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 LPCAT1Q8NF37 534 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 NLGN4YQ8NFZ3 816 aaPredicted RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 ZNF564Q8TBZ8 553 aaPredicted RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 CCHCR1Q8TD31 782 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 KIAA1143Q96AT1 154 aaPredicted RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 FAF2Q96CS3 445 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 RTP4Q96DX8 246 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 SLC45A3Q96JT2 553 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 SMIM14Q96QK8 99 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 WDR24Q96S15 920 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 EFHD1Q9BUP0 239 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 ADGRE3Q9BY15 652 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 KRTAP4-2Q9BYR5 136 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 SPRY4Q9C004 299 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 CARD9Q9H257 536 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 FAM83DQ9H4H8 585 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 FBXO8Q9NRD0 319 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 IGSF5Q9NSI5 407 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 OCIAD1Q9NX40 245 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 TBC1D29Q9UFV1 150 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 ZNHIT2Q9UHR6 403 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 CNOT6Q9ULM6 557 aaKnown RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 CHKBQ9Y259 395 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 DYRK1BQ9Y463 629 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 TTLL3Q9Y4R7 772 aa7.54□□□□□ -1.2
NEK3-201ENST00000550331 PCYT1BQ9Y5K3 369 aaPredicted RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 OAS3Q9Y6K5 1087 aaKnown RBP7.54□□□□□ -1.2
NEK3-201ENST00000550331 MN1Q10571 1320 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 ANKRD36A6QL64 1941 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 KIR2DS5A0A0G2JLQ3 304 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 A0A0G2JNG1 304 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 BLACEA4D250 179 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 CLEC18AA5D8T8 446 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 LILRA5A6NI73 299 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 FADS2P1A8MWK0 482 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 KIR2DS3K7RE56 304 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 GRID2O43424 1007 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 NUAK1O60285 661 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 PROSCO94903 275 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 ATP1A1P05023 1023 aaKnown RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 KRT7P08729 469 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 ANKRD34CP0C6C1 535 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 ACP5P13686 325 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 PPM1FP49593 454 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 CLCNKAP51800 687 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 POLE2P56282 527 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 TPM4P67936 248 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 IFI35P80217 286 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 GBE1Q04446 702 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 NIPAL4Q0D2K0 466 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 KCNAB2Q13303 367 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 NFATC2Q13469 925 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 MAP7Q14244 749 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 KIR2DS5Q14953 304 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 IQCB1Q15051 598 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 QPCTQ16769 361 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 CRTC2Q53ET0 693 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 CLEC18BQ6UXF7 455 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 SLC9B2Q86UD5 537 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 CCDC13Q8IYE1 715 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 FAM26EQ8N5C1 309 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.53□□□□□ -1.2
NEK3-201ENST00000550331 PQLC3Q8N755 202 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 KCTD6Q8NC69 237 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 CLEC18CQ8NCF0 446 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 ZNF830Q96NB3 372 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 MLPHQ9BV36 600 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 TRIT1Q9H3H1 467 aaKnown RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 GPN2Q9H9Y4 310 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 UCK1Q9HA47 277 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 LRRC4CQ9HCJ2 640 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 RAD18Q9NS91 495 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 DTLQ9NZJ0 730 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 UVRAGQ9P2Y5 699 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 NFKBIL1Q9UBC1 381 aaPredicted RBP7.53□□□□□ -1.2
NEK3-201ENST00000550331 CPNE7Q9UBL6 633 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 CAPN11Q9UMQ6 739 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 NENFQ9UMX5 172 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 KCNK6Q9Y257 313 aa7.53□□□□□ -1.2
NEK3-201ENST00000550331 PRKAB1Q9Y478 270 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms