RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 SEL1L2Q5TEA6 688 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 PDPK2PQ6A1A2 396 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 FAM83HQ6ZRV2 1179 aaPredicted RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 DET1Q7L5Y6 550 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 LRRTM4Q86VH4 590 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 TRAPPC5Q8IUR0 188 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 RCBTB1Q8NDN9 531 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 OR6C4Q8NGE1 309 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 GDAP1Q8TB36 358 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 ZNF398Q8TD17 642 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 PMEPA1Q969W9 287 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 RTP4Q96DX8 246 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 DNAJC1Q96KC8 554 aaKnown RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 SLC46A1Q96NT5 459 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 SRPK1Q96SB4 655 aaKnown RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 FERMT1Q9BQL6 677 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 ARNT2Q9HBZ2 717 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 SMARCAL1Q9NZC9 954 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 ZNF624Q9P2J8 865 aaPredicted RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 WDR37Q9Y2I8 494 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 AAR2Q9Y312 384 aaKnown RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 PKP3Q9Y446 797 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 SDK2Q58EX2 2172 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 A0A087WV48 116 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 CCDC187A0A096LP49 1063 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 IGHV5-10-1A0A0J9YXX1 117 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 OR52A4PA6NMU1 304 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 CDRT15L2A8MXV6 281 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 VEGFDO43915 354 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 SRP72O76094 671 aaKnown RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 DXOO77932 396 aaKnown RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 AP2A1O95782 977 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 IFNB1P01574 187 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 CCL4P13236 92 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 F3P13726 295 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 PBLDP30039 288 aaPredicted RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 CCKBRP32239 447 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 SLC19A1P41440 591 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 FASLGP48023 281 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 KCNJ1P48048 391 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 ARSDP51689 593 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 HHEXQ03014 270 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 SEPT6Q14141 434 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 POU6F1Q14863 301 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 CLCA4Q14CN2 919 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 INSCQ1MX18 579 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 MAP9Q49MG5 647 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 CCDC38Q502W7 563 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 PHF19Q5T6S3 580 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 TMEM220Q6QAJ8 160 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 RAB11FIP2Q7L804 512 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 REXO1L1PQ8IX06 675 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 FBXO39Q8N4B4 442 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 DDHD1Q8NEL9 900 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 OR52K1Q8NGK4 314 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 WDR36Q8NI36 951 aaKnown RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 WDR48Q8TAF3 677 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 BRSK1Q8TDC3 778 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 JPH3Q8WXH2 748 aaPredicted RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 FGF11Q92914 225 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 SGF29Q96ES7 293 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 LIN37Q96GY3 246 aaPredicted RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 CCDC74BQ96LY2 380 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 TBC1D10AQ9BXI6 508 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 ASB8Q9H765 288 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 KCNK4Q9NYG8 393 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 FAM8A1Q9UBU6 413 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 PISDQ9UG56 409 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 PSMD13Q9UNM6 376 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 LHX6Q9UPM6 363 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 ZNF148Q9UQR1 794 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 SLC30A1Q9Y6M5 507 aa9.63□□□□□ -0.87
HDAC7-229ENST00000549883 DSPP15924 2871 aaKnown RBP9.63□□□□□ -0.87
HDAC7-229ENST00000549883 ZFYVE26Q68DK2 2539 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 AHCTF1Q8WYP5 2266 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 GOLGA6L3A6NEY3 463 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 OR51F1A6NGY5 319 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 C2orf81A6NN90 581 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 PDZK1P1A8MUH7 402 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 PLD2O14939 933 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 KMOO15229 486 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 CEP104O60308 925 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 POP7O75817 140 aaKnown RBP9.62□□□□□ -0.87
HDAC7-229ENST00000549883 CPNE6O95741 557 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 FGGP02679 453 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 RPL22P35268 128 aaKnown RBP9.62□□□□□ -0.87
HDAC7-229ENST00000549883 ACTN2P35609 894 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 MAPK9P45984 424 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 GPR3P46089 330 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 CLCNKAP51800 687 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 UBE2IP63279 158 aaKnown RBP9.62□□□□□ -0.87
HDAC7-229ENST00000549883 SRSF6Q13247 344 aaKnown RBP9.62□□□□□ -0.87
HDAC7-229ENST00000549883 BIRC2Q13490 618 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 NFE2L1Q14494 772 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 P3H1Q32P28 736 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 LDLRAP1Q5SW96 308 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms