RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TIMM29Q9BSF4 260 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 SYNDIG1Q9H7V2 258 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 CRLS1Q9UJA2 301 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 DNAJC16Q9Y2G8 782 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 SLC30A1Q9Y6M5 507 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 ASPMQ8IZT6 3477 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 GOLGA6L10A0A0M3HER8 536 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 A0A1W2PQM1 296 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 HEATR9A2RTY3 570 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 RHPN2P1A8MT19 583 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 PPM1DO15297 605 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 PHF2O75151 1096 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 CSO75390 466 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 TCEA3O75764 348 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 RPLP0P05388 317 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 PROS1P07225 676 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 MSH3P20585 1137 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 ADRA1DP25100 572 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 AKT1P31749 480 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 VPS41P49754 854 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 ARSDP51689 593 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 BIRC2Q13490 618 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 SPIDRQ14159 915 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 SKIDA1Q1XH10 827 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 IYDQ6PHW0 289 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 TMEM220Q6QAJ8 160 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 RBM44Q6ZP01 1051 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 ZNF438Q7Z4V0 828 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 SPRED1Q7Z699 444 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 CCNJLQ8IV13 435 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 NXPE1Q8N323 547 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 SFRP1Q8N474 314 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 SLC37A2Q8TED4 501 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 ULK4Q96C45 1275 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 RANBP9Q96S59 729 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 NAPGQ99747 312 aaPredicted RBP18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 LRRN3Q9H3W5 708 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 OSGEPL1Q9H4B0 414 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 PRDM8Q9NQV8 689 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 PCDHB1Q9Y5F3 818 aa18.45■□□□□ 0.54
PRPF40B-206ENST00000547764 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 PRR19A6NJB7 356 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 OR2AG2A6NM03 316 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 B4GAT1O43505 415 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 F3P13726 295 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 CDKN1CP49918 316 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 TERF1P54274 439 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 B4GALNT1Q00973 533 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 GPS1Q13098 491 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 LAMB3Q13751 1172 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 ISXQ2M1V0 245 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 GPR33Q49SQ1 333 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 ZRANB3Q5FWF4 1079 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 DET1Q7L5Y6 550 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 NAT14Q8WUY8 206 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 SGF29Q96ES7 293 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 CCDC97Q96F63 343 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 GFM1Q96RP9 751 aaKnown RBP18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 KCND1Q9NSA2 647 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 NEU2Q9Y3R4 380 aa18.44■□□□□ 0.54
PRPF40B-206ENST00000547764 COL27A1Q8IZC6 1860 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 UNC13CQ8NB66 2214 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 TRBV5-4A0A0C4DH59 114 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 TCRBV7S3A2A0A539 114 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 POP7O75817 140 aaKnown RBP18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 CAPNS1P04632 268 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 PRSS56P0CW18 603 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 TPSB2P20231 275 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 ALDH4A1P30038 563 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 FASLGP48023 281 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 FNTAP49354 379 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 SESN2P58004 480 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 OR1D5P58170 312 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 CDK16Q00536 496 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 NR1D2Q14995 579 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 TPSAB1Q15661 275 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 FNBP1LQ5T0N5 605 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 TSTD2Q5T7W7 516 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 AMZ2Q86W34 360 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 OR13J1Q8NGT2 312 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 DCUN1D1Q96GG9 259 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 ZNF514Q96K75 400 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 CAPZA3Q96KX2 299 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 ZNF778Q96MU6 729 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 COPS8Q99627 209 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 SLC2A6Q9UGQ3 507 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 RIMKLBQ9ULI2 386 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 TCAF1Q9Y4C2 921 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 SAR1BQ9Y6B6 198 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 DNMT3AQ9Y6K1 912 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 IGF2RP11717 2491 aa18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 MAP1BP46821 2468 aaKnown RBP18.43■□□□□ 0.54
PRPF40B-206ENST00000547764 CTAGE9A4FU28 777 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 TMEM8BA6NDV4 472 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 OR5K4A6NMS3 321 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 FANCGO15287 622 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 KCNJ13O60928 360 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 SLC2A4P14672 509 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 VCLP18206 1134 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms