RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MAU2Q9Y6X3 613 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ARHGEF40Q8TER5 1519 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ATP2A1O14983 1001 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 IGLV1-44P01699 117 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 TFAP2AP05549 437 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 ZNF26P17031 533 aaPredicted RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 MSH3P20585 1137 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 MCCP23508 829 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 LUMP51884 338 aaPredicted RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 SPOCK1Q08629 439 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 FRG1Q14331 258 aaKnown RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 CCNG2Q16589 344 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 PNLIPRP3Q17RR3 467 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 ZNF805Q5CZA5 627 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 SLC38A9Q8NBW4 561 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 MYRIPQ8NFW9 859 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 WDR20Q8TBZ3 569 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 HM13Q8TCT9 377 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 INTS12Q96CB8 462 aaKnown RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 RRP36Q96EU6 259 aaKnown RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 MAP7D2Q96T17 732 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 SIL1Q9H173 461 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 PIGMQ9H3S5 423 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 BICC1Q9H694 974 aaKnown RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 ZBTB20Q9HC78 741 aaPredicted RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 PDP2Q9P2J9 529 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 UBA2Q9UBT2 640 aaPredicted RBP3.79□□□□□ -1.8
CCDC38-204ENST00000546816 STK39Q9UEW8 545 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 JRKLQ9Y4A0 524 aa3.79□□□□□ -1.8
CCDC38-204ENST00000546816 ANKRD66B4E2M5 251 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 SYNCRIPO60506 623 aaKnown RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 SEC14L2O76054 403 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 ICAM1P05362 532 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 PRCPP42785 496 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 RARSP54136 660 aaKnown RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 DSCR10P59022 87 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 OLR1P78380 273 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 CEBPZQ03701 1054 aaKnown RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 PDE1CQ14123 709 aaPredicted RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 SOWAHCQ53LP3 525 aaPredicted RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 SDCCAG8Q86SQ7 713 aaPredicted RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 PM20D2Q8IYS1 436 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 CPXCR1Q8N123 301 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 RASGEF1CQ8N431 466 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 GBGT1Q8N5D6 347 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 TSPYL6Q8N831 410 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 METTL6Q8TCB7 284 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 ZUFSPQ96AP4 578 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 PERPQ96FX8 193 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 OXNAD1Q96HP4 312 aaPredicted RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 EGLN2Q96KS0 407 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 RANGRFQ9HD47 186 aaPredicted RBP3.78□□□□□ -1.8
CCDC38-204ENST00000546816 C2orf42Q9NWW7 574 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 MTMR10Q9NXD2 777 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 RNF215Q9Y6U7 377 aa3.78□□□□□ -1.8
CCDC38-204ENST00000546816 DISP3Q9P2K9 1392 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 DUXAA6NLW8 204 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 EIF4E1BA6NMX2 242 aaKnown RBP3.77□□□□□ -1.81
CCDC38-204ENST00000546816 BUD23O43709 281 aaKnown RBP3.77□□□□□ -1.81
CCDC38-204ENST00000546816 ZNF821O75541 412 aaPredicted RBP3.77□□□□□ -1.81
CCDC38-204ENST00000546816 CAVIN2O95810 425 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 NR3C1P04150 777 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 NR2F2P24468 414 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 KRT9P35527 623 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 RGS2P41220 211 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 RPL7AP62424 266 aaKnown RBP3.77□□□□□ -1.81
CCDC38-204ENST00000546816 CSTF3Q12996 717 aaKnown RBP3.77□□□□□ -1.81
CCDC38-204ENST00000546816 DPCR1Q3MIW9 517 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 LRIF1Q5T3J3 769 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 LONP2Q86WA8 852 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 EMC1Q8N766 993 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 TMEM116Q8NCL8 245 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 RDM1Q8NG50 284 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 ZNF473Q8WTR7 871 aaKnown RBP3.77□□□□□ -1.81
CCDC38-204ENST00000546816 SEMA3CQ99985 751 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 SLX1AQ9BQ83 275 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 PSD2Q9BQI7 771 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 CRYL1Q9Y2S2 319 aa3.77□□□□□ -1.81
CCDC38-204ENST00000546816 TMEM184BQ9Y519 407 aaPredicted RBP3.77□□□□□ -1.81
CCDC38-204ENST00000546816 NOTCH2Q04721 2471 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 A0A0G2JLW4 131 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 A6NLC8 198 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 H0YIN7 160 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 SLC22A2O15244 555 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 EIF3JO75822 258 aaKnown RBP3.76□□□□□ -1.81
CCDC38-204ENST00000546816 IGHV4-38-2P0DP08 117 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 MAP2K2P36507 400 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 PBX3P40426 434 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 IRX1P78414 480 aaPredicted RBP3.76□□□□□ -1.81
CCDC38-204ENST00000546816 MRPS34P82930 218 aaKnown RBP3.76□□□□□ -1.81
CCDC38-204ENST00000546816 SEPT14Q6ZU15 432 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 SLC5A8Q8N695 610 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 HCAR2Q8TDS4 363 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 FAM149B1Q96BN6 582 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 WDFY2Q96P53 400 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 SEPT5Q99719 369 aaPredicted RBP3.76□□□□□ -1.81
CCDC38-204ENST00000546816 PDZD7Q9H5P4 517 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 POLR1BQ9H9Y6 1135 aa3.76□□□□□ -1.81
CCDC38-204ENST00000546816 APOBEC3GQ9HC16 384 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms