RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 DSN1Q9H410 356 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 GLOD4Q9HC38 313 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ENTPD4Q9Y227 616 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 FAM50BQ9Y247 325 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 FAM149AA5PLN7 773 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 INMTO95050 263 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 IFNGP01579 166 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 UNGP13051 313 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-212ENST00000546744 AP1S2P56377 157 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 FKBP1AP62942 108 aaKnown RBP12.7□□□□□ -0.38
PTCH1-212ENST00000546744 SWI5Q1ZZU3 235 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 WSCD2Q2TBF2 565 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 AP5B1Q2VPB7 878 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PTPN20Q4JDL3 420 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 GARNL3Q5VVW2 1013 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ANKRD22Q5VYY1 191 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ANKRD13BQ86YJ7 626 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ZDHHC21Q8IVQ6 265 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ELMOD2Q8IZ81 293 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PHC3Q8NDX5 983 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 COL21A1Q96P44 957 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 BBS4Q96RK4 519 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 SLC9A7Q96T83 725 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 GBA3Q9H227 469 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 MAB21L2Q9Y586 359 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PCDHGB3Q9Y5G1 929 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 TEX46H3BTG2 121 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 B4GALT4O60513 344 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 B3GAT3O94766 335 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 RPS12P25398 132 aaKnown RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 GRIA1P42261 906 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CLCN3P51790 818 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 KCNA10Q16322 511 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 OGFOD2Q6N063 350 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 C8orf48Q96LL4 319 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 LRTM1Q9HBL6 345 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 RAB23Q9ULC3 237 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 FAM86C2PA6NEL3 165 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 LACTBL1A8MY62 500 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CXCR6O00574 342 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 DLGAP1O14490 977 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 SLITRK5O94991 958 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 MAGP20916 626 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 LPOP22079 712 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 YWHAQP27348 245 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 OR1E1P30953 314 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 ARMC12Q5T9G4 340 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 HECTD2Q5U5R9 776 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 FAM83AQ86UY5 434 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CHCHD4Q8N4Q1 142 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 C10orf53Q8N6V4 93 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 RASSF1Q9NS23 344 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 PCDHGB6Q9Y5F9 930 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 MAGED1Q9Y5V3 778 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 SLC15A5A6NIM6 579 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 SMIM22K7EJ46 135 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 GPR182O15218 404 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 OAS1P00973 400 aaKnown RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 HOXD12P35452 270 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CDH8P55286 799 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 ERVK-8P63133 956 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 STARD3Q14849 445 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 COLEC12Q5KU26 742 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 KIAA0930Q6ICG6 404 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 TMEM214Q6NUQ4 689 aaKnown RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 OR4L1Q8NH43 312 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 FAM136AQ96C01 138 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 TPK1Q9H3S4 243 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 DNAJC11Q9NVH1 559 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 RABL2AQ9UBK7 228 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 FBXO9Q9UK97 447 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 RABL2BQ9UNT1 228 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 LYVE1Q9Y5Y7 322 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 A0A088AWK7 358 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 SLC12A8A0AV02 714 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 IFNW1P05000 195 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CYP4B1P13584 511 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF10P21506 573 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 DNAJA1P31689 397 aaKnown RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 SCNN1AP37088 669 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 ABCG1P45844 678 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 POLR2LP62875 67 aaKnown RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CTBP1Q13363 440 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 CCNIQ14094 377 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 ADNP2Q6IQ32 1131 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 FBXO42Q6P3S6 717 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 FSTL5Q8N475 847 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-212ENST00000546744 LINC00471Q8N535 108 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 UFD1Q92890 307 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 FEM1AQ9BSK4 669 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 COLEC11Q9BWP8 271 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 SNTG2Q9NY99 539 aa12.69□□□□□ -0.38
PTCH1-212ENST00000546744 HSPE1-MOB4S4R3N1 261 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms