RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 DMWDQ09019 674 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 CPSF6Q16630 551 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 SLC25A52Q3SY17 297 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PDCD4Q53EL6 469 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF776Q68DI1 518 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 FAM180AQ6UWF9 173 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 CFAP206Q8IYR0 622 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ATXN2LQ8WWM7 1075 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 HDAC10Q969S8 669 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 TMEM175Q9BSA9 504 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 VPS45Q9NRW7 570 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 GDAP2Q9NXN4 497 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PTTG2Q9NZH5 202 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF229Q9UJW7 825 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 KLHL20Q9Y2M5 609 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 TCRBV7S2A1N4TA0A589 114 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 MCIDASD6RGH6 385 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PRR23D1E9PI22 279 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ZSCAN5DPP0CG00 497 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PRR23D2P0DMB1 279 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 THRAP10827 490 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 TCF4P15884 667 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 GNAZP19086 355 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 IGFBP6P24592 240 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CMPK1P30085 196 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 FOXB2Q5VYV0 432 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 HFE2Q6ZVN8 426 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CRYBG2Q8N1P7 616 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 C12orf76Q8N812 135 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 HCAR2Q8TDS4 363 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 DDX1Q92499 740 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 HPS1Q92902 700 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PIWIL1Q96J94 861 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CPNE1Q99829 537 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PIF1Q9H611 641 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SLCO1B3Q9NPD5 702 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SEMA4BQ9NPR2 832 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 FBXO6Q9NRD1 293 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 WHRNQ9P202 907 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 WNT6Q9Y6F9 365 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ZNFX1Q9P2E3 1918 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 OR2AG2A6NM03 316 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 H3BN98 237 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 TAF4O00268 1085 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 FFAR3O14843 346 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 GPR42O15529 346 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 MAN1A2O60476 641 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 TBX18O95935 607 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SLC35G6P0C7Q6 338 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 NR2F1P10589 423 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 DDX6P26196 483 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ABCG1P45844 678 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 RXRGP48443 463 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CCT8P50990 548 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CASP6P55212 293 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 AP1S1P61966 158 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CYP4F2P78329 520 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PDK3Q15120 406 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 OASLQ15646 514 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PDE12Q6L8Q7 609 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 C16orf46Q6P387 395 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 EXOC3L1Q86VI1 746 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CROCCP3Q8IVE0 287 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF563Q8TA94 476 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PYDC1Q8WXC3 89 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 RNF157Q96PX1 679 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 GAL3ST4Q96RP7 486 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SLC39A3Q9BRY0 314 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 BTBD10Q9BSF8 475 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 MAGEH1Q9H213 219 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ALG9Q9H6U8 611 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PLGRKTQ9HBL7 147 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PSMD13Q9UNM6 376 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SNX10Q9Y5X0 201 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 TMEM221A6NGB7 291 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CES2O00748 559 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 APOA1P02647 267 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF23P17027 643 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 RPL3P39023 403 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 COPAP53621 1224 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ADAM17P78536 824 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ITGADQ13349 1161 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 LPAL2Q16609 132 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 GPAT3Q53EU6 434 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SMUG1Q53HV7 270 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SYPL2Q5VXT5 272 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 METTL21CQ5VZV1 264 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 MBLAC2Q68D91 279 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ARHGAP17Q68EM7 881 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 KRT77Q7Z794 578 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 MOSPD2Q8NHP6 518 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 UTP15Q8TED0 518 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PMEPA1Q969W9 287 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 COX4I2Q96KJ9 171 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CA14Q9ULX7 337 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 TBC1D30Q9Y2I9 924 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms