RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SPOCD1Q6ZMY3 1216 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 RCOR2Q8IZ40 523 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 AVL9Q8NBF6 648 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 OR4D9Q8NGE8 314 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 ART4Q93070 314 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 SH3KBP1Q96B97 665 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 EID2BQ96D98 161 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 AHCYL2Q96HN2 611 aaKnown RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 SLC45A3Q96JT2 553 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 VAT1Q99536 393 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 NUDT22Q9BRQ3 303 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 GPN2Q9H9Y4 310 aaPredicted RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 SARS2Q9NP81 518 aaKnown RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 SHOC2Q9UQ13 582 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 TP53TG5Q9Y2B4 290 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 ZNF711Q9Y462 761 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 PCDHGA3Q9Y5H0 932 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 OAS3Q9Y6K5 1087 aaKnown RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 PRRC2CQ9Y520 2896 aaKnown RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 IGHV5-10-1A0A0J9YXX1 117 aa16■□□□□ 0.15
DDX55-212ENST00000544738 OR5K4A6NMS3 321 aa16■□□□□ 0.15
DDX55-212ENST00000544738 GRID2O43424 1007 aa16■□□□□ 0.15
DDX55-212ENST00000544738 MT-CYBP00156 380 aaPredicted RBP16■□□□□ 0.15
DDX55-212ENST00000544738 PIRTP0C851 137 aa16■□□□□ 0.15
DDX55-212ENST00000544738 PTPN3P26045 913 aa16■□□□□ 0.15
DDX55-212ENST00000544738 COL8A1P27658 744 aa16■□□□□ 0.15
DDX55-212ENST00000544738 CYLC1P35663 651 aaPredicted RBP16■□□□□ 0.15
DDX55-212ENST00000544738 KAZNQ674X7 775 aa16■□□□□ 0.15
DDX55-212ENST00000544738 IYDQ6PHW0 289 aa16■□□□□ 0.15
DDX55-212ENST00000544738 KATNAL2Q8IYT4 538 aa16■□□□□ 0.15
DDX55-212ENST00000544738 TRAM1L1Q8N609 369 aa16■□□□□ 0.15
DDX55-212ENST00000544738 GPR26Q8NDV2 337 aa16■□□□□ 0.15
DDX55-212ENST00000544738 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
DDX55-212ENST00000544738 OR10G6Q8NH81 332 aa16■□□□□ 0.15
DDX55-212ENST00000544738 SPATA22Q8NHS9 363 aa16■□□□□ 0.15
DDX55-212ENST00000544738 SLC37A2Q8TED4 501 aa16■□□□□ 0.15
DDX55-212ENST00000544738 RBM41Q96IZ5 413 aaKnown RBP16■□□□□ 0.15
DDX55-212ENST00000544738 CALR3Q96L12 384 aaKnown RBP16■□□□□ 0.15
DDX55-212ENST00000544738 SLC38A3Q99624 504 aa16■□□□□ 0.15
DDX55-212ENST00000544738 HERPUD2Q9BSE4 406 aa16■□□□□ 0.15
DDX55-212ENST00000544738 TRIM39Q9HCM9 518 aa16■□□□□ 0.15
DDX55-212ENST00000544738 SLC39A1Q9NY26 324 aa16■□□□□ 0.15
DDX55-212ENST00000544738 SAE1Q9UBE0 346 aaPredicted RBP16■□□□□ 0.15
DDX55-212ENST00000544738 FAM153AQ9UHL3 310 aa16■□□□□ 0.15
DDX55-212ENST00000544738 PRKAB1Q9Y478 270 aa16■□□□□ 0.15
DDX55-212ENST00000544738 PCDHA13Q9Y5I0 950 aa16■□□□□ 0.15
DDX55-212ENST00000544738 POLQO75417 2590 aa16■□□□□ 0.15
DDX55-212ENST00000544738 FBN2P35556 2912 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 TRBV23OR9-2A0A075B6M9 112 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 KIR2DS5A0A0G2JLQ3 304 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 A0A0G2JNG1 304 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 EFCAB7A8K855 629 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 KIR2DS3K7RE56 304 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 PMPCBO75439 489 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 EPOP01588 193 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 ACP5P13686 325 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 F3P13726 295 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 CSTF2P33240 577 aaKnown RBP eCLIP15.99■□□□□ 0.15
DDX55-212ENST00000544738 CLCNKAP51800 687 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 HHEXQ03014 270 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 CDC20Q12834 499 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 KIR2DS5Q14953 304 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.99■□□□□ 0.15
DDX55-212ENST00000544738 NKAIN2Q5VXU1 208 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 C11orf63Q6NUN7 778 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 C16orf46Q6P387 395 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 TMEM71Q6P5X7 295 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 B4GALNT4Q76KP1 1039 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 SLC9B2Q86UD5 537 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 PHYKPLQ8IUZ5 450 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 CCDC50Q8IVM0 306 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 UNC5BQ8IZJ1 945 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 AGBL5Q8NDL9 886 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 GLYATL1Q969I3 302 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 KIAA1143Q96AT1 154 aaPredicted RBP15.99■□□□□ 0.15
DDX55-212ENST00000544738 CCDC74BQ96LY2 380 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.99■□□□□ 0.15
DDX55-212ENST00000544738 OR2AG1Q9H205 316 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 TRABDQ9H4I3 376 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 ATXN10Q9UBB4 475 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 TBC1D29Q9UFV1 150 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 KCNK6Q9Y257 313 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 C2CD3Q4AC94 2353 aa15.99■□□□□ 0.15
DDX55-212ENST00000544738 hCG_1818297A0A087WSY0 165 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 HACD1B0YJ81 288 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 K7EM74 188 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 KRT38O76015 456 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 PECAM1P16284 738 aaPredicted RBP15.98■□□□□ 0.15
DDX55-212ENST00000544738 MPSTP25325 297 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 OAS2P29728 719 aaKnown RBP15.98■□□□□ 0.15
DDX55-212ENST00000544738 HMGCLP35914 325 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 PPM1FP49593 454 aaPredicted RBP15.98■□□□□ 0.15
DDX55-212ENST00000544738 WASHC5Q12768 1159 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 ZDHHC20Q5W0Z9 365 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 ALS2CLQ60I27 953 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 CAPRIN2Q6IMN6 1127 aaKnown RBP15.98■□□□□ 0.15
DDX55-212ENST00000544738 PID1Q7Z2X4 250 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 DAAM2Q86T65 1068 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 EFCAB3Q8N7B9 438 aa15.98■□□□□ 0.15
DDX55-212ENST00000544738 PLEKHG4BQ96PX9 1271 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms