RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 NR1D2Q14995 579 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 AMZ1Q400G9 498 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 AARS2Q5JTZ9 985 aaKnown RBP5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 SIRPB2Q5JXA9 342 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 PHF19Q5T6S3 580 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 ALS2CLQ60I27 953 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 ARMC6Q6NXE6 501 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 FOXR1Q6PIV2 292 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 WDR74Q6RFH5 385 aaPredicted RBP5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 PCSK4Q6UW60 755 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 WASH2PQ6VEQ5 465 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 PPP1R21Q6ZMI0 780 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 RAB11FIP2Q7L804 512 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 SPRED1Q7Z699 444 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 AMZ2Q86W34 360 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 LRRC8AQ8IWT6 810 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 Q8N9G6 341 aaPredicted RBP5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 AGBL5Q8NDL9 886 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 OR4D9Q8NGE8 314 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 SPATA22Q8NHS9 363 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 SNIP1Q8TAD8 396 aaKnown RBP5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 GSDMBQ8TAX9 411 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 ZFPM2Q8WW38 1151 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 KCNE4Q8WWG9 221 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 TADA1Q96BN2 335 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 ZDHHC12Q96GR4 267 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 PBKQ96KB5 322 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 MRGPRX2Q96LB1 330 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 SLC46A1Q96NT5 459 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 DCBLD2Q96PD2 775 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 TRIB3Q96RU7 358 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 CEP41Q9BYV8 373 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 TCEAL2Q9H3H9 227 aaPredicted RBP5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 UCK1Q9HA47 277 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 ARNT2Q9HBZ2 717 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 EPB41L5Q9HCM4 733 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 LZTFL1Q9NQ48 299 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 MRPL40Q9NQ50 206 aaKnown RBP5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 WASH6PQ9NQA3 447 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 KLC4Q9NSK0 619 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 POT1Q9NUX5 634 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 TMEM98Q9Y2Y6 226 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 JRKLQ9Y4A0 524 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 MRFAP1Q9Y605 127 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 ADGRG1Q9Y653 693 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 DUSP10Q9Y6W6 482 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 DOCK9Q9BZ29 2069 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 TMEM131Q92545 1883 aa5.54□□□□□ -1.52
CLSTN3-215ENST00000544584 LY6G6EA0A0G2JKS1 128 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 C17orf113A0A1B0GUU1 675 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 HEATR9A2RTY3 570 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 MATN2O00339 956 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 NDC80O14777 642 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 CHUKO15111 745 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 NVLO15381 856 aaKnown RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 CAPN5O15484 640 aaPredicted RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 KIF5CO60282 957 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 NOBOXO60393 691 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 BRINP1O60477 761 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 SNX2O60749 519 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 DNAJC6O75061 913 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 AP2A2O94973 939 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 PRAMEF1O95521 474 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 AP2A1O95782 977 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 RPN2P04844 631 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ATP1A1P05023 1023 aaKnown RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 GIMD1P0DJR0 217 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ACP5P13686 325 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 PECAM1P16284 738 aaPredicted RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 BPIP17213 487 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 XRCC1P18887 633 aaPredicted RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 PSMB4P28070 264 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 CD68P34810 354 aaPredicted RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 POLD2P49005 469 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ARL4DP49703 201 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TMPRSS3P57727 454 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 CCL7P80098 99 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 PRKAA1Q13131 559 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 NFATC2Q13469 925 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 GSE1Q14687 1217 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 LLGL1Q15334 1064 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TCEA2Q15560 299 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 CCNG2Q16589 344 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 C3orf38Q5JPI3 329 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TPRG1LQ5T0D9 272 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 MEI1Q5TIA1 1274 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TMEM71Q6P5X7 295 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 DRICH1Q6PGQ1 229 aaPredicted RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 IYDQ6PHW0 289 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 XKR5Q6UX68 686 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 FAM151BQ6UXP7 276 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 RANBP10Q6VN20 620 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 CERS6Q6ZMG9 384 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TAS2R42Q7RTR8 314 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ZNF438Q7Z4V0 828 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 SNX20Q7Z614 316 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 HOOK3Q86VS8 718 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 BPHLQ86WA6 291 aaPredicted RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 CPNE8Q86YQ8 564 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms