RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SBK3P0C264 359 aa30.09■■■□□ 2.41
CCM2-219ENST00000544363 AKT1P31749 480 aa30.09■■■□□ 2.41
CCM2-219ENST00000544363 CRY1Q16526 586 aa30.09■■■□□ 2.41
CCM2-219ENST00000544363 LDLRAP1Q5SW96 308 aa30.09■■■□□ 2.41
CCM2-219ENST00000544363 NKAPQ8N5F7 415 aaKnown RBP30.09■■■□□ 2.41
CCM2-219ENST00000544363 GIMAP7Q8NHV1 300 aa30.09■■■□□ 2.41
CCM2-219ENST00000544363 CCT8L2Q96SF2 557 aa30.09■■■□□ 2.41
CCM2-219ENST00000544363 MRPL46Q9H2W6 279 aaKnown RBP30.09■■■□□ 2.41
CCM2-219ENST00000544363 SARS2Q9NP81 518 aaKnown RBP30.09■■■□□ 2.41
CCM2-219ENST00000544363 TARM1B6A8C7 271 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 CFAP99D6REC4 459 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 SOD1P00441 154 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 RBP1P09455 135 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 ATP1B2P14415 290 aaPredicted RBP30.08■■■□□ 2.41
CCM2-219ENST00000544363 CD1DP15813 335 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 DRD4P21917 467 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 KCNA4P22459 653 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 TECRLQ5HYJ1 363 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 USP30Q70CQ3 517 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 SYNPOQ8N3V7 929 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 BCAS4Q8TDM0 211 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 FZD4Q9ULV1 537 aa30.08■■■□□ 2.41
CCM2-219ENST00000544363 MRPS17Q9Y2R5 130 aaKnown RBP30.08■■■□□ 2.41
CCM2-219ENST00000544363 SLC25A14O95258 325 aaPredicted RBP30.07■■■□□ 2.4
CCM2-219ENST00000544363 FAM107AO95990 144 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 RALBP11234 206 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 MSH3P20585 1137 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 SFSWAPQ12872 951 aaKnown RBP30.07■■■□□ 2.4
CCM2-219ENST00000544363 ZYG11AQ6WRX3 759 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 Q6ZS52 159 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 C10orf107Q8IVU9 208 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 PELI3Q8N2H9 469 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 OR14C36Q8NHC7 312 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 RAB3IL1Q8TBN0 382 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 LKAAEAR1Q8TD35 194 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 DERL2Q9GZP9 239 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 FAM107BQ9H098 131 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 NCKAP1Q9Y2A7 1128 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 TCRBV21S2A2A0A5A6 115 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 KRBA1A5PL33 1030 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 C19orf67A6NJJ6 358 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 KLF11O14901 512 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 TRIM16O95361 564 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 OR56A5P0C7T3 313 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 MYL2P10916 166 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 ACADMP11310 421 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 NDUFV2P19404 249 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 TARSP26639 723 aaKnown RBP30.07■■■□□ 2.4
CCM2-219ENST00000544363 GPR1P46091 355 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 LRRC32Q14392 662 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 AGERQ15109 404 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 CHI3L2Q15782 390 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 RAET1GQ6H3X3 334 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 CPLX4Q7Z7G2 160 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 KBTBD6Q86V97 674 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 INPP5DQ92835 1189 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 LMAN1LQ9HAT1 526 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 FBXL21Q9UKT6 434 aa30.07■■■□□ 2.4
CCM2-219ENST00000544363 CNOT6Q9ULM6 557 aaKnown RBP30.07■■■□□ 2.4
CCM2-219ENST00000544363 K7ESM1 405 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 MTX2O75431 263 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 ITGB6P18564 788 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 TFEBP19484 476 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 STARD6P59095 220 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 IL2P60568 153 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 KHDC1Q4VXA5 237 aaKnown RBP30.06■■■□□ 2.4
CCM2-219ENST00000544363 ISCA2Q86U28 154 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 PHYKPLQ8IUZ5 450 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 SHDQ96IW2 340 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 PANX3Q96QZ0 392 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 LATS2Q9NRM7 1088 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 FGFR1OP2Q9NVK5 253 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 THEGQ9P2T0 379 aa30.06■■■□□ 2.4
CCM2-219ENST00000544363 ZFR2Q9UPR6 939 aaKnown RBP30.06■■■□□ 2.4
CCM2-219ENST00000544363 CHURC1-FNTBB4DL54 471 aa30.05■■■□□ 2.4
CCM2-219ENST00000544363 ZBTB14O43829 449 aa30.05■■■□□ 2.4
CCM2-219ENST00000544363 AP2A2O94973 939 aa30.05■■■□□ 2.4
CCM2-219ENST00000544363 ADPRHP54922 357 aa30.05■■■□□ 2.4
CCM2-219ENST00000544363 ATP6V0D1P61421 351 aa30.05■■■□□ 2.4
CCM2-219ENST00000544363 RPS21P63220 83 aaKnown RBP30.05■■■□□ 2.4
CCM2-219ENST00000544363 ATG16L1Q676U5 607 aa30.05■■■□□ 2.4
CCM2-219ENST00000544363 SEL1L3Q68CR1 1132 aa30.05■■■□□ 2.4
CCM2-219ENST00000544363 KIAA1324Q6UXG2 1013 aaKnown RBP30.05■■■□□ 2.4
CCM2-219ENST00000544363 SPATS2LQ9NUQ6 558 aaKnown RBP30.05■■■□□ 2.4
CCM2-219ENST00000544363 INPP4BO15327 924 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 TSPAN12O95859 305 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 FGF3P11487 239 aaPredicted RBP30.04■■■□□ 2.4
CCM2-219ENST00000544363 KIAA1161Q6NSJ0 714 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 DET1Q7L5Y6 550 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 CPNE9Q8IYJ1 553 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 EEF1AKMT1Q8WVE0 214 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 PTERQ96BW5 349 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 NSRP1Q9H0G5 558 aaKnown RBP30.04■■■□□ 2.4
CCM2-219ENST00000544363 TFB2MQ9H5Q4 396 aaKnown RBP30.04■■■□□ 2.4
CCM2-219ENST00000544363 ALG9Q9H6U8 611 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 LTB4R2Q9NPC1 389 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 SLCO1B3Q9NPD5 702 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 TRPM6Q9BX84 2022 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 GABRG2P18507 467 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 ZNF648Q5T619 568 aaPredicted RBP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms