RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 SYTL2Q9HCH5 934 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 ZNF302Q9NR11 478 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 EHD3Q9NZN3 535 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 ERVW-1Q9UQF0 538 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 GPSM3Q9Y4H4 160 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 PCDHGB6Q9Y5F9 930 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 CAPN5O15484 640 aaPredicted RBP10.26□□□□□ -0.77
TCF4-209ENST00000544241 AIREO43918 545 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 DFNA5O60443 496 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 CPB1P15086 417 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 TCF3P15923 654 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 NOS2P35228 1153 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 RGS7P49802 495 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 TAS2R39P59534 338 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 NFKB2Q00653 900 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 CAPSQ13938 189 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 FUT11Q495W5 492 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 CLEC6AQ6EIG7 209 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 CCSAPQ6IQ19 270 aaPredicted RBP10.26□□□□□ -0.77
TCF4-209ENST00000544241 DENND5AQ6IQ26 1287 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 PKN3Q6P5Z2 889 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 ZNF767PQ75MW2 155 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 HIPK1Q86Z02 1210 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 CCDC117Q8IWD4 279 aaPredicted RBP10.26□□□□□ -0.77
TCF4-209ENST00000544241 CPXCR1Q8N123 301 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 PAF1Q8N7H5 531 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 OR5K1Q8NHB7 308 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 RNF139Q8WU17 664 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 SLC38A4Q969I6 547 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 PHF21BQ96EK2 531 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 NIFKQ9BYG3 293 aaKnown RBP10.26□□□□□ -0.77
TCF4-209ENST00000544241 NXF2Q9GZY0 626 aaKnown RBP10.26□□□□□ -0.77
TCF4-209ENST00000544241 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 HMGXB4Q9UGU5 601 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 V9GYQ6 96 aa10.26□□□□□ -0.77
TCF4-209ENST00000544241 A0A1W2PQ72 361 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 NEMP2A6NFY4 417 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 SNTNA6NMZ2 147 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 CDK2AP1O14519 115 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 AZIN1O14977 448 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 HS6ST1O60243 411 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 MT-CO1P00395 513 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 PRKCBP05771 671 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 NR3C2P08235 984 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 ASNSP08243 561 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 IL7P13232 177 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 HGFP14210 728 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 SPNP16150 400 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 CTRB1P17538 263 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 HRH2P25021 359 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 ERP29P30040 261 aaKnown RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 PIGAP37287 484 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 ETV3P41162 512 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 HERVK_113P63132 956 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 RACK1P63244 317 aaKnown RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 KEAP1Q14145 624 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 TRIP4Q15650 581 aaPredicted RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 PYCR3Q53H96 274 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 ZNF678Q5SXM1 525 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 STRIP1Q5VSL9 837 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 CTRB2Q6GPI1 263 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 RBM23Q86U06 439 aaKnown RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 CACTIN-AS1Q8N1I8 211 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 BEND7Q8N7W2 519 aaPredicted RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 ZNF540Q8NDQ6 660 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 PPHLN1Q8NEY8 458 aaKnown RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 ST13P5Q8NFI4 369 aaPredicted RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 DNERQ8NFT8 737 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 BLOC1S5Q8TDH9 187 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 TWIST2Q8WVJ9 160 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.773e-7■■■■□ 23.2
TCF4-209ENST00000544241 ST6GAL2Q96JF0 529 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 PPP1R2P1Q96PQ5 205 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 ERVK-6Q9BXR3 956 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 GORASP2Q9H8Y8 452 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 ACOT13Q9NPJ3 140 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 IGSF5Q9NSI5 407 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 NRBP2Q9NSY0 501 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 CDH9Q9ULB4 789 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 FZD10Q9ULW2 581 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 AAR2Q9Y312 384 aaKnown RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 MAFBQ9Y5Q3 323 aaPredicted RBP10.25□□□□□ -0.77
TCF4-209ENST00000544241 DNAJC15Q9Y5T4 150 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 SSC5DA1L4H1 1573 aa10.25□□□□□ -0.77
TCF4-209ENST00000544241 KCNK1O00180 336 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 PRMT5O14744 637 aaPredicted RBP10.24□□□□□ -0.77
TCF4-209ENST00000544241 STX7O15400 261 aaKnown RBP10.24□□□□□ -0.77
TCF4-209ENST00000544241 PDPK1O15530 556 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 NOS1APO75052 506 aaPredicted RBP10.24□□□□□ -0.77
TCF4-209ENST00000544241 UGT2B17O75795 530 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 ITGB3P05106 788 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 CAPN1P07384 714 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 CHRM3P20309 590 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 TIE1P35590 1138 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 HTR2BP41595 481 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 IL12RB1P42701 662 aa10.24□□□□□ -0.77
TCF4-209ENST00000544241 PPP3CCP48454 512 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms