RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 NUAK1O60285 661 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DNAJC6O75061 913 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 NDUFS3O75489 264 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ERVK-10P10266 1014 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SSTR1P30872 391 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RXRGP48443 463 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TTPAP49638 278 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SEMA3AQ14563 771 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PRRT3Q5FWE3 981 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 STEAP4Q687X5 459 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CRTC3Q6UUV7 619 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TRAPPC5Q8IUR0 188 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 UNC5BQ8IZJ1 945 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GSDMBQ8TAX9 411 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CALML6Q8TD86 181 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 OR2M4Q96R27 311 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 FAM167BQ9BTA0 163 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 BOCQ9BWV1 1114 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TCEAL2Q9H3H9 227 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TMEM9BQ9NQ34 198 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TM7SF3Q9NS93 570 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 IARS2Q9NSE4 1012 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SPASTQ9UBP0 616 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 OR2AG2A6NM03 316 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GRID2O43424 1007 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PIAS2O75928 621 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 FUCA1P04066 466 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ATP1B2P14415 290 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 OGNP20774 298 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 NSG1P42857 185 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 BNIP3Q12983 259 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ITIH4Q14624 930 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ERCC6LQ2NKX8 1250 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PLA2G4EQ3MJ16 856 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PYCR3Q53H96 274 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZNF470Q6ECI4 717 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TMEM220Q6QAJ8 160 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 C3orf62Q6ZUJ4 267 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CHST15Q7LFX5 561 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 LRRTM4Q86VH4 590 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 LMNTD2Q8IXW0 634 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RASGEF1AQ8N9B8 481 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GPR150Q8NGU9 434 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 LMX1AQ8TE12 382 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 NAT14Q8WUY8 206 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 FAM122AQ96E09 287 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SGF29Q96ES7 293 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SCARF2Q96GP6 870 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 LRRC61Q9BV99 259 aa14.3□□□□□ -0.12
TNFRSF1A-216ENST00000543995 IGLV3-16A0A075B6K0 115 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 UBA6A0AVT1 1052 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CDX4O14627 284 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CHUKO15111 745 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 KMOO15229 486 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GDF9O60383 454 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZNF7P17097 686 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 EPHA8P29322 1005 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 B4GALNT1Q00973 533 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CTBP1Q13363 440 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 C1orf61Q13536 156 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SHBQ15464 509 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 UAP1L1Q3KQV9 507 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RNF187Q5TA31 235 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TRMT10BQ6PF06 316 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GATAD2AQ86YP4 633 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CILP2Q8IUL8 1156 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DENND6AQ8IWF6 608 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GSPT2Q8IYD1 628 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 KIAA2013Q8IYS2 634 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZNF548Q8NEK5 533 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TMEM168Q9H0V1 697 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 VPS37BQ9H9H4 285 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PLAC1Q9HBJ0 212 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DNAAF2Q9NVR5 837 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DOLKQ9UPQ8 538 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PCYT1BQ9Y5K3 369 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 OTOGLQ3ZCN5 2332 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 KNL1Q8NG31 2342 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 BPTFQ12830 3046 aa14.29□□□□□ -0.12
TNFRSF1A-216ENST00000543995 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 NEMP2A6NFY4 417 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 AQP9O43315 295 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 OR1I1O60431 355 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GSTA2P09210 222 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ACP5P13686 325 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DGKAP23743 735 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TNFRSF8P28908 595 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SLC1A2P43004 574 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CTSCP53634 463 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ILF3Q12906 894 aaKnown RBP eCLIP14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SLMAPQ14BN4 828 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SUZ12Q15022 739 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ELOCQ15369 112 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 INSCQ1MX18 579 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TYSND1Q2T9J0 566 aa14.28□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PACS1Q6VY07 963 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms