RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ABRAXAS1Q6UWZ7 409 aa22.26■■□□□ 1.15
CDKN3-207ENST00000543789 LRRTM4Q86VH4 590 aa22.26■■□□□ 1.15
CDKN3-207ENST00000543789 MIB2Q96AX9 1013 aa22.26■■□□□ 1.15
CDKN3-207ENST00000543789 TIMM29Q9BSF4 260 aa22.26■■□□□ 1.15
CDKN3-207ENST00000543789 POT1Q9NUX5 634 aa22.26■■□□□ 1.15
CDKN3-207ENST00000543789 FLNCQ14315 2725 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 K7EM74 188 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 SPAG6O75602 509 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 FURINP09958 794 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 PIRTP0C851 137 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 NR1D1P20393 614 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 IFI35P80217 286 aaPredicted RBP22.25■■□□□ 1.15
CDKN3-207ENST00000543789 PPIDQ08752 370 aaKnown RBP22.25■■□□□ 1.15
CDKN3-207ENST00000543789 ZBTB17Q13105 803 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 CACHD1Q5VU97 1274 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 PRSS42Q7Z5A4 293 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 ZDHHC12Q96GR4 267 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 TRIB3Q96RU7 358 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 GPR63Q9BZJ6 419 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 SLC40A1Q9NP59 571 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 TMEM63CQ9P1W3 806 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 CTTNBP2NLQ9P2B4 639 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 NFKBIL1Q9UBC1 381 aaPredicted RBP22.25■■□□□ 1.15
CDKN3-207ENST00000543789 PADI1Q9ULC6 663 aa22.25■■□□□ 1.15
CDKN3-207ENST00000543789 MTSS1O43312 755 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 VEGFDO43915 354 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 CDK14O94921 469 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 FGF5P12034 268 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 RPL10P27635 214 aaKnown RBP22.24■■□□□ 1.15
CDKN3-207ENST00000543789 ZBED6P86452 979 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 WASH2PQ6VEQ5 465 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 ASB18Q6ZVZ8 466 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 NT5DC3Q86UY8 548 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 ATCAYQ86WG3 371 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 RBM12BQ8IXT5 1001 aaKnown RBP22.24■■□□□ 1.15
CDKN3-207ENST00000543789 CPLX3Q8WVH0 158 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 KLHL6Q8WZ60 621 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 RSC1A1Q92681 617 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 RNF157Q96PX1 679 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 WASH6PQ9NQA3 447 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 EPHA6Q9UF33 1036 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 LNPEPQ9UIQ6 1025 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 NBASA2RRP1 2371 aa22.24■■□□□ 1.15
CDKN3-207ENST00000543789 PIPSLA2A3N6 862 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 CDC14CA4D256 554 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 GOLGA6L3A6NEY3 463 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 OR52A4PA6NMU1 304 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 KIF1CO43896 1103 aaKnown RBP22.23■■□□□ 1.15
CDKN3-207ENST00000543789 MTX2O75431 263 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 RECKO95980 971 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 SLC4A1P02730 911 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 BRAFP15056 766 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 IDSP22304 550 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 KDELR1P24390 212 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 CAPZBP47756 277 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 CD97P48960 835 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.23■■□□□ 1.15
CDKN3-207ENST00000543789 AGAP9Q5VTM2 703 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 FAM92BQ6ZTR7 304 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 PPP1R3BQ86XI6 285 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 ZNF547Q8IVP9 402 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 RAPGEF5Q92565 580 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 CXorf40BQ96DE9 158 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 IMP4Q96G21 291 aaKnown RBP22.23■■□□□ 1.15
CDKN3-207ENST00000543789 PSMG3-AS1Q96PY0 264 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 TWSG1Q9GZX9 223 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 UVRAGQ9P2Y5 699 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 TLK1Q9UKI8 766 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 CAPN11Q9UMQ6 739 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 ZNF711Q9Y462 761 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 PCDHGA6Q9Y5G7 932 aa22.23■■□□□ 1.15
CDKN3-207ENST00000543789 CREG1O75629 220 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 RFPL1O75677 317 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 MT-ND3P03897 115 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 BPIP17213 487 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 NELFEP18615 380 aaKnown RBP22.22■■□□□ 1.15
CDKN3-207ENST00000543789 MLLT10P55197 1068 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 CDK18Q07002 472 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 AP1B1Q10567 949 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 GPR18Q14330 331 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 FAM182AQ5T1J6 154 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 IRGCQ6NXR0 463 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 CYB5D1Q6P9G0 228 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 TMEM135Q86UB9 458 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 AGAP3Q96P47 875 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 RAB33BQ9H082 229 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 TRIM10Q9UDY6 481 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 LCMT1Q9UIC8 334 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 HEY1Q9Y5J3 304 aa22.22■■□□□ 1.15
CDKN3-207ENST00000543789 VCLP18206 1134 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 PBX1P40424 430 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 PMS2P54278 862 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 DRG2P55039 364 aaKnown RBP22.21■■□□□ 1.15
CDKN3-207ENST00000543789 DNASE1L3Q13609 305 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 IQCB1Q15051 598 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 PCSK7Q16549 785 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 KHDC1Q4VXA5 237 aaKnown RBP22.21■■□□□ 1.15
CDKN3-207ENST00000543789 CCDC70Q6NSX1 233 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 PLD5Q8N7P1 536 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 SRPK1Q96SB4 655 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms