RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 BST1Q10588 318 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 VEZF1Q14119 521 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 CCDC142Q17RM4 750 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 RNLSQ5VYX0 342 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 FAM92BQ6ZTR7 304 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 DCXRQ7Z4W1 244 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 ARL14Q8N4G2 192 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 TMCO6Q96DC7 493 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 MRPL48Q96GC5 212 aaKnown RBP8.83□□□□□ -1
VPS13D-212ENST00000543766 TRNT1Q96Q11 434 aaKnown RBP8.83□□□□□ -1
VPS13D-212ENST00000543766 OSMRQ99650 979 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 PRMT1Q99873 361 aaKnown RBP8.83□□□□□ -1
VPS13D-212ENST00000543766 ELOVL6Q9H5J4 265 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 GPRC5CQ9NQ84 441 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 EXOGQ9Y2C4 368 aaKnown RBP8.83□□□□□ -1
VPS13D-212ENST00000543766 DLDP09622 509 aaKnown RBP8.83□□□□□ -1
VPS13D-212ENST00000543766 RALBP11234 206 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 LCP1P13796 627 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 RAB4AP20338 218 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 KLK7P49862 253 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 RPL10AP62906 217 aaKnown RBP8.83□□□□□ -1
VPS13D-212ENST00000543766 SP2Q02086 613 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 HIC1Q14526 733 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 DLG2Q15700 870 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 ATP6AP1Q15904 470 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 ZFP69Q49AA0 526 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 HIKESHIQ53FT3 197 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 ATAT1Q5SQI0 421 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 ATXN7L2Q5T6C5 722 aaPredicted RBP8.83□□□□□ -1
VPS13D-212ENST00000543766 TAF8Q7Z7C8 310 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 PDIK1LQ8N165 341 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 AGAP2Q99490 1192 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 GPR63Q9BZJ6 419 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 COQ10BQ9H8M1 238 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 CATSPERZQ9NTU4 200 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 NSMCE4AQ9NXX6 385 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 PTPN22Q9Y2R2 807 aa8.83□□□□□ -1
VPS13D-212ENST00000543766 ZNF839A8K0R7 811 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 B2RBV5 119 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 CASC3O15234 703 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 DLGAP3O95886 979 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 GSRP00390 522 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 RBP1P09455 135 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 EFNA1P20827 205 aaPredicted RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 HOXA6P31267 233 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TMEM35AQ53FP2 167 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 LRP10Q7Z4F1 713 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 NEK8Q86SG6 692 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 FOXRED2Q8IWF2 684 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 C1orf52Q8N6N3 182 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 ACTRT1Q8TDG2 376 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 HSD17B8Q92506 261 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 SPACA9Q96E40 222 aaPredicted RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 TMEM41AQ96HV5 264 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 C9orf72Q96LT7 481 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TEFMQ96QE5 360 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 MLXIPLQ9NP71 852 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 C1orf112Q9NSG2 853 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 RSL24D1Q9UHA3 163 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 NDUFB9Q9Y6M9 179 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ADGRA2Q96PE1 1338 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TRAF5O00463 557 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 XYLBO75191 536 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ALDH1A1P00352 501 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TPOP07202 933 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 T-ENOLP0DO92 83 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TATP17735 454 aaPredicted RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 CYP2B6P20813 491 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 MCM7P33993 719 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 SLC34A1Q06495 639 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 RPA4Q13156 261 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ORC2Q13416 577 aaPredicted RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 EMC2Q15006 297 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TAB1Q15750 504 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ZNF568Q3ZCX4 644 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ESCO2Q56NI9 601 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 C18orf63Q68DL7 685 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TTC33Q6PID6 262 aaPredicted RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 TMEM26Q6ZUK4 368 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 FKBP9P1Q75LS8 142 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 NET1Q7Z628 596 aaPredicted RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 NXPE1Q8N323 547 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 NANOS1Q8WY41 292 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 SNAPC3Q92966 411 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 SLC9A7Q96T83 725 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 OR2B2Q9GZK3 357 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ZDHHC18Q9NUE0 388 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 MAU2Q9Y6X3 613 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 CLUHO75153 1309 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 PVALEFA0A1B0GWK0 134 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 A4D1N5 150 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 C5orf51A6NDU8 294 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 CPNE3O75131 537 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 SOAT2O75908 522 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 CD36P16671 472 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 HOXA1P49639 335 aaPredicted RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 NOMO3P69849 1222 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TXNL4AP83876 142 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 ARF5P84085 180 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms