RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 FZD10Q9ULW2 581 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 TNPO3Q9Y5L0 923 aaKnown RBP12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 TLL2Q9Y6L7 1015 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 MYH9P35579 1960 aaKnown RBP12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 A0A1W2PPW3 197 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 MYADML2A6NDP7 307 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 NIPSNAP2O75323 286 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 ALDOAP04075 364 aaKnown RBP12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 CYP4F8P98187 520 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 BNIP2Q12982 314 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 PCLAFQ15004 111 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 ZNF549Q6P9A3 640 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 CROCCP3Q8IVE0 287 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 AMER2Q8N7J2 671 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 SIDT2Q8NBJ9 832 aaKnown RBP12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 SLC47A1Q96FL8 570 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 ART5Q96L15 291 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 CHCHD6Q9BRQ6 235 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 PDP1Q9P0J1 537 aaPredicted RBP12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 ADAMTS6Q9UKP5 1117 aa12.84□□□□□ -0.35
TUBGCP2-210ENST00000543663 ARL5CA6NH57 179 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 SCAMP1O15126 338 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 RSL1D1O76021 490 aaKnown RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 EDNRBP24530 442 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 EPHB3P54753 998 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 CRHR2Q13324 411 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 CDCA2Q69YH5 1023 aaPredicted RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FGD2Q7Z6J4 655 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 YAF2Q8IY57 180 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 PHF10Q8WUB8 498 aaKnown RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 TP53INP1Q96A56 240 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 CRISPLD1Q9H336 500 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 CD84Q9UIB8 345 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 RAB26Q9ULW5 256 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FAM159BA6NKW6 160 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 VPS4BO75351 444 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 ANGPTL1O95841 491 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 OTCP00480 354 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 C1RP00736 705 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 SLC18A2Q05940 514 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 RNASE12Q5GAN4 147 aaKnown RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 HECTD3Q5T447 861 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 SEPT8Q92599 483 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 PPP3R2Q96LZ3 170 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 COPS4Q9BT78 406 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 SPRTNQ9H040 489 aaPredicted RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 ZFYVE1Q9HBF4 777 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 OXSMQ9NWU1 459 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 F5P12259 2224 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 CACNA1CQ13936 2221 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FAM72CH0Y354 149 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 TSPAN19P0C672 248 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 THRBP10828 461 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 MYCLP1P12525 358 aaPredicted RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 RPS24P62847 133 aaKnown RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 SPIBQ01892 262 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 PRKCZQ05513 592 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FAM72AQ5TYM5 149 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FAM72DQ6L9T8 149 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 MON1AQ86VX9 555 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FAM72BQ86X60 149 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 SIX5Q8N196 739 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 PIK3C3Q8NEB9 887 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 VANGL1Q8TAA9 524 aaPredicted RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 FBXL20Q96IG2 436 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 BTBD9Q96Q07 612 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 TMEM209Q96SK2 561 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 AKTIPQ9H8T0 292 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 VPS4AQ9UN37 437 aa12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 COL11A2P13942 1736 aaPredicted RBP12.83□□□□□ -0.36
TUBGCP2-210ENST00000543663 A0A1B0GVG6 124 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 ZBTB42B2RXF5 422 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 H7C4K7 107 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 J3KR12 359 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 SOCS7O14512 581 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 PRMT5O14744 637 aaPredicted RBP12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 OR10H3O60404 316 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 T-ENOLP0DO92 83 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 GDF5P43026 501 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 SLC10A2Q12908 348 aaPredicted RBP12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 MFSD4BQ5TF39 518 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 OLFML1Q6UWY5 402 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 ZNF554Q86TJ5 538 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 CLIP4Q8N3C7 705 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 HOPXQ9BPY8 73 aaPredicted RBP12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 ZNF624Q9P2J8 865 aaPredicted RBP12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 SLC9A8Q9Y2E8 581 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 PTGDR2Q9Y5Y4 395 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 OR2AG2A6NM03 316 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 UGT1A1P22309 533 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 UGT1A4P22310 534 aa12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 HOXA11P31270 313 aaPredicted RBP12.82□□□□□ -0.36
TUBGCP2-210ENST00000543663 UGT1A3P35503 534 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms