RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 PDE1CQ14123 709 aaPredicted RBP2.26□□□□□ -2.05
KNTC1-213ENST00000542727 EEF1A1P5Q5VTE0 462 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 SNX30Q5VWJ9 437 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 ARHGAP17Q68EM7 881 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 SLC35E4Q6ICL7 350 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 GFRALQ6UXV0 394 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 RAD9BQ6WBX8 426 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 SH2D6Q7Z4S9 175 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 TMEM219Q86XT9 240 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 ARHGAP12Q8IWW6 846 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 RNF113BQ8IZP6 322 aaKnown RBP2.26□□□□□ -2.05
KNTC1-213ENST00000542727 ADSSL1Q8N142 457 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 WDTC1Q8N5D0 677 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 NGEFQ8N5V2 710 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 MAPK1IP1LQ8NDC0 245 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 ACVR1CQ8NER5 493 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 HM13Q8TCT9 377 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 POMGNT1Q8WZA1 660 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 USP6NLQ92738 828 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 SKA1Q96BD8 255 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 ARHGEF26Q96DR7 871 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 ZNF583Q96ND8 569 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 GAD1Q99259 594 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 BARD1Q99728 777 aaKnown RBP2.26□□□□□ -2.05
KNTC1-213ENST00000542727 ITPAQ9BY32 194 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 LRMDAQ9H2I8 198 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 SLC7A10Q9NS82 523 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 TMEM30AQ9NV96 361 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 FBXL2Q9UKC9 423 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 OR2W1Q9Y3N9 320 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 CLIC4Q9Y696 253 aa2.26□□□□□ -2.05
KNTC1-213ENST00000542727 MYH15Q9Y2K3 1946 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 PTPRCP08575 1304 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 A0A1W2PQF6 199 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 LIPT2A6NK58 231 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 BLOC1S5-TXNDC5H3BN57 136 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 ATP2A1O14983 1001 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 ICAM1P05362 532 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 TMEM11P17152 192 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 ITGA2P17301 1181 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 PSMA4P25789 261 aaKnown RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 HOXC9P31274 260 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 CLDN20P56880 219 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 GEMIN4P57678 1058 aaKnown RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 ARF3P61204 181 aaPredicted RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 ARF1P84077 181 aaKnown RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 PPP2R2BQ00005 443 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 NIPAL4Q0D2K0 466 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 MAD2L1Q13257 205 aaPredicted RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 GTF2H2Q13888 395 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 EIF4A2Q14240 407 aaKnown RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 PNLIPRP3Q17RR3 467 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 TMEM35AQ53FP2 167 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 STXBP5Q5T5C0 1151 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 NSUN5P2Q63ZY6 315 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 TMEM198Q66K66 360 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 C18orf63Q68DL7 685 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 GTF2H2CQ6P1K8 395 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 FAM171BQ6P995 826 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 NCEH1Q6PIU2 408 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 CEACAM20Q6UY09 585 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 GLDNQ6ZMI3 551 aaPredicted RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 CLEC17AQ6ZS10 378 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 CACNA2D4Q7Z3S7 1137 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 CCDC190Q86UF4 302 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 TEX11Q8IYF3 940 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 TTC39CQ8N584 583 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 HJURPQ8NCD3 748 aaPredicted RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 KLHDC9Q8NEP7 349 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 OR5R1Q8NH85 324 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 GSDMBQ8TAX9 411 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 UTP15Q8TED0 518 aaKnown RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 SLC44A1Q8WWI5 657 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 PIGTQ969N2 578 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 ELMOD3Q96FG2 381 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 C1orf74Q96LT6 269 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 SDF4Q9BRK5 362 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 CHCHD6Q9BRQ6 235 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 SYT17Q9BSW7 474 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 POLR3CQ9BUI4 534 aaPredicted RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 SMARCAD1Q9H4L7 1026 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 SH2D4AQ9H788 454 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 CWC15Q9P013 229 aaKnown RBP2.25□□□□□ -2.05
KNTC1-213ENST00000542727 STK39Q9UEW8 545 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 PADI3Q9ULW8 664 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 MTMR6Q9Y217 621 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 B3GALT5Q9Y2C3 310 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 ARHGEF40Q8TER5 1519 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 PRAG1Q86YV5 1406 aa2.25□□□□□ -2.05
KNTC1-213ENST00000542727 TDRD9Q8NDG6 1382 aaKnown RBP2.24□□□□□ -2.05
KNTC1-213ENST00000542727 CACNA1FO60840 1977 aa2.24□□□□□ -2.05
KNTC1-213ENST00000542727 FRMD3A2A2Y4 597 aa2.24□□□□□ -2.05
KNTC1-213ENST00000542727 EIF4E1BA6NMX2 242 aaKnown RBP2.24□□□□□ -2.05
KNTC1-213ENST00000542727 ANKRD28O15084 1053 aa2.24□□□□□ -2.05
KNTC1-213ENST00000542727 PLPP2O43688 288 aa2.24□□□□□ -2.05
KNTC1-213ENST00000542727 HS6ST1O60243 411 aa2.24□□□□□ -2.05
KNTC1-213ENST00000542727 WDR1O75083 606 aa2.24□□□□□ -2.05
KNTC1-213ENST00000542727 DDX58O95786 925 aaKnown RBP2.24□□□□□ -2.05
KNTC1-213ENST00000542727 KRT19P08727 400 aa2.24□□□□□ -2.05
KNTC1-213ENST00000542727 ACADMP11310 421 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms