RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 PRR11Q96HE9 360 aaPredicted RBP15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 KLC4Q9NSK0 619 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 URB1O60287 2271 aaKnown RBP15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 KIR2DS5A0A0G2JLQ3 304 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 A0A0G2JNG1 304 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 MROH6A6NGR9 719 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 TMX2-CTNND1H3BSU7 103 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 H7C0S8 307 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 KIR2DS3K7RE56 304 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 MPOP05164 745 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 CD1CP29017 333 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 CCKBRP32239 447 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 RPL22P35268 128 aaKnown RBP15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 HADHAP40939 763 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 KIR2DS5Q14953 304 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 LONRF2Q1L5Z9 754 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 SLITRK4Q8IW52 837 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 PRELID2Q8N945 189 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 ZCCHC2Q9C0B9 1178 aaKnown RBP15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 ASB8Q9H765 288 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 SARS2Q9NP81 518 aaKnown RBP15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 PRDM8Q9NQV8 689 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 RAB6BQ9NRW1 208 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 HOMER3Q9NSC5 361 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 NLE1Q9NVX2 485 aaPredicted RBP15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 PAK5Q9P286 719 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 ATXN7L1Q9ULK2 861 aaPredicted RBP15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 TTC7AQ9ULT0 858 aaPredicted RBP15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 RAXQ9Y2V3 346 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 PCDHGA8Q9Y5G5 932 aa15.22■□□□□ 0.03
ECHDC2-223ENST00000542552 TRBV23OR9-2A0A075B6M9 112 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 IGHV1OR21-1A0A087WYE8 117 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 OR5K4A6NMS3 321 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 ZW10O43264 779 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 TLX3O43711 291 aaPredicted RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 SNX2O60749 519 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 KCNJ13O60928 360 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 CPNE6O95741 557 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 ZSCAN5DPP0CG00 497 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 SLC2A4P14672 509 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 ALDH4A1P30038 563 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 ACTN2P35609 894 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 CTSCP53634 463 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 INHBCP55103 352 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 UBE2IP63279 158 aaKnown RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 GABREP78334 506 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 DMPKQ09013 629 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 GTF2H3Q13889 308 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 POU6F1Q14863 301 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 INSCQ1MX18 579 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 PLA2G4EQ3MJ16 856 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 AGAP9Q5VTM2 703 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 ABRAXAS1Q6UWZ7 409 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 C4orf22Q6V702 233 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 WASH2PQ6VEQ5 465 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 TRAPPC5Q8IUR0 188 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 LSMEM2Q8N112 164 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 CCDC89Q8N998 374 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 OR52K1Q8NGK4 314 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 WDR36Q8NI36 951 aaKnown RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 ZNF514Q96K75 400 aaPredicted RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 PBKQ96KB5 322 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 DNAJC1Q96KC8 554 aaKnown RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 TTC25Q96NG3 672 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 TMEM74Q96NL1 305 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 FOXP3Q9BZS1 431 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 ASCL3Q9NQ33 180 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 WASH6PQ9NQA3 447 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 PIH1D1Q9NWS0 290 aaKnown RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 SCHIP1Q9P0W5 487 aaPredicted RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 SATB2Q9UPW6 733 aa15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 DNMT3AQ9Y6K1 912 aaPredicted RBP15.21■□□□□ 0.03
ECHDC2-223ENST00000542552 CCDC187A0A096LP49 1063 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 TRBV5-4A0A0C4DH59 114 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 PMS2P1A4D2B8 440 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 CCL22O00626 93 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 SGTAO43765 313 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 POP7O75817 140 aaKnown RBP15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 BRAFP15056 766 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 XRCC1P18887 633 aaPredicted RBP15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 GRIA1P42261 906 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 KCNJ1P48048 391 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 TMPRSS15P98073 1019 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 CDH17Q12864 832 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 TBC1D25Q3MII6 688 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 GPR33Q49SQ1 333 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 TMEM220Q6QAJ8 160 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 ZNF574Q6ZN55 896 aaPredicted RBP15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 SNX20Q7Z614 316 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 PIM3Q86V86 326 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 NXPE1Q8N323 547 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC35F6Q8N357 371 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 SNIP1Q8TAD8 396 aaKnown RBP15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 STYXQ8WUJ0 223 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 CDKN2AIPNLQ96HQ2 116 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 ZNF578Q96N58 590 aaPredicted RBP15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC46A1Q96NT5 459 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 NUDT22Q9BRQ3 303 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms