RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 G3BP2Q9UN86 482 aaKnown RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 hCG_2014768A0A024R1R8 64 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 DCDC2BA2VCK2 349 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ISPDA4D126 451 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 C7orf72A4D263 438 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 TMEM247A6NEH6 219 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 SHISA7A6NL88 538 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 TARM1B6A8C7 271 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 CLDN25C9JDP6 229 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 UBXN8O00124 270 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 FBP2O00757 339 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 SUPT3HO75486 399 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 SERPINB7O75635 380 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ZMPSTE24O75844 475 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 C1RP00736 705 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 LTA4HP09960 611 aaKnown RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 OR4Q2P0C623 313 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 MBL2P11226 248 aaPredicted RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 FCARP24071 287 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 EEF1DP29692 281 aaKnown RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 GDI1P31150 447 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 HOXA9P31269 272 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 RAP1GAPP47736 663 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 SULT1E1P49888 294 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ENTPD1P49961 510 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ERFP50548 548 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 NDST2P52849 883 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 CDH8P55286 799 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 NFKB2Q00653 900 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 PFKPQ01813 784 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 GSTM4Q03013 218 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 KCNC4Q03721 635 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 RIPPLY1Q0D2K3 151 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 TWF1Q12792 350 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 SLC10A2Q12908 348 aaPredicted RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 PUM1Q14671 1186 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHFR-219ENST00000541341 RPS6KA2Q15349 733 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 FAM78AQ5JUQ0 283 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 KCTD11Q693B1 232 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 OVOS1Q6IE37 1185 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 TIGD7Q6NT04 549 aaPredicted RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 PMF1Q6P1K2 205 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 NAPRTQ6XQN6 538 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ANKS3Q6ZW76 656 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 OSTM1Q86WC4 334 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 PTRH1Q86Y79 214 aaKnown RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 MIER2Q8N344 545 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 CCNYL1Q8N7R7 359 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 PIK3C3Q8NEB9 887 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 SPPL2BQ8TCT7 592 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 PEX13Q92968 403 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 USP13Q92995 863 aaPredicted RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 NT5C3BQ969T7 300 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 L3HYPDHQ96EM0 354 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 HSPBAP1Q96EW2 488 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 PGAP3Q96FM1 320 aaPredicted RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 MYRFLQ96LU7 910 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 PGLYRP2Q96PD5 576 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 CIB1Q99828 191 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ACBD6Q9BR61 282 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 MRPL45Q9BRJ2 306 aaKnown RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 RAD21L1Q9H4I0 556 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 RPF2Q9H7B2 306 aaKnown RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 POPDC3Q9HBV1 291 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 GTSE1Q9NYZ3 720 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ZDHHC2Q9UIJ5 367 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 ANAPC2Q9UJX6 822 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 NME7Q9Y5B8 376 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 TIMM13Q9Y5L4 95 aaPredicted RBP10.32□□□□□ -0.76
CHFR-219ENST00000541341 SNX5Q9Y5X3 404 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 BACE2Q9Y5Z0 518 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 PSAT1Q9Y617 370 aa10.32□□□□□ -0.76
CHFR-219ENST00000541341 TTC24A2A3L6 582 aaPredicted RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 E7ENX8 843 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 H3BMQ9 156 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 H7C4K7 107 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 PHGDHO43175 533 aaKnown RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 DLX3O60479 287 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 ECI2O75521 394 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 SULT1C4O75897 302 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 PAPSS2O95340 614 aaPredicted RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 ZBTB11O95625 1053 aaPredicted RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 CHEK2O96017 543 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 CPB1P15086 417 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 GOT1P17174 413 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 IMPDH1P20839 514 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 CCNCP24863 283 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 PTPN3P26045 913 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 GSTM2P28161 218 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 GNL1P36915 607 aaPredicted RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 RPS9P46781 194 aaKnown RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 SOX9P48436 509 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 SLC5A3P53794 718 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 TPI1P60174 286 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 YWHAHQ04917 246 aaPredicted RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 SPEM2Q0P670 501 aa10.31□□□□□ -0.76
CHFR-219ENST00000541341 SRSF5Q13243 272 aaKnown RBP10.31□□□□□ -0.76
CHFR-219ENST00000541341 FZD5Q13467 585 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms