RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 VPS18Q9P253 973 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 ARL5AQ9Y689 179 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 ADAMTS20P59510 1910 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 SCN8AQ9UQD0 1980 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.06□□□□□ -0.16
LTBR-209ENST00000541102 CCDC187A0A096LP49 1063 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 CCDC188H7C350 402 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 KIF2AO00139 706 aaPredicted RBP14.06□□□□□ -0.16
LTBR-209ENST00000541102 SNX2O60749 519 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 TMEM63AO94886 807 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 ACP5P13686 325 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 INHBCP55103 352 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 B4GALNT1Q00973 533 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 PTK6Q13882 451 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 LRP8Q14114 963 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 ZNF534Q76KX8 674 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 C17orf82Q86X59 251 aaPredicted RBP14.06□□□□□ -0.16
LTBR-209ENST00000541102 TRAM1L1Q8N609 369 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 WDR36Q8NI36 951 aaKnown RBP14.06□□□□□ -0.16
LTBR-209ENST00000541102 KIF18AQ8NI77 898 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 SNIP1Q8TAD8 396 aaKnown RBP14.06□□□□□ -0.16
LTBR-209ENST00000541102 CRELD1Q96HD1 420 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 ZSCAN5AQ9BUG6 496 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 STRADBQ9C0K7 418 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 ATXN10Q9UBB4 475 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 KCNK6Q9Y257 313 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 FREM2Q5SZK8 3169 aa14.06□□□□□ -0.16
LTBR-209ENST00000541102 ESPNB1AK53 854 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 E7EVH7 732 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 TMX2-CTNND1H3BSU7 103 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 PPM1DO15297 605 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 TP73O15350 636 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 GRID2O43424 1007 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 RAD51CO43502 376 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 NUAK1O60285 661 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 ZNF500O60304 480 aaPredicted RBP14.05□□□□□ -0.16
LTBR-209ENST00000541102 TNFSF15O95150 251 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 EML2O95834 649 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 TUBB4AP04350 444 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 ZNF8P17098 575 aaPredicted RBP14.05□□□□□ -0.16
LTBR-209ENST00000541102 CA5AP35218 305 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 ABCG1P45844 678 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 PPM1FP49593 454 aaPredicted RBP14.05□□□□□ -0.16
LTBR-209ENST00000541102 DCDC1P59894 354 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 DR1Q01658 176 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 PPP1R7Q15435 360 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 WHAMMP3Q1A5X7 153 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 PDZD3Q86UT5 571 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 FBXO39Q8N4B4 442 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 LRRN4CLQ8ND94 238 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 GRK7Q8WTQ7 553 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 GLYATL1Q969I3 302 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 TMEM74Q96NL1 305 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 SLC46A1Q96NT5 459 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 TRABDQ9H4I3 376 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 RMI1Q9H9A7 625 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 RDH14Q9HBH5 336 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 TRIM39Q9HCM9 518 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 CASS4Q9NQ75 786 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 THSD1Q9NS62 852 aa14.05□□□□□ -0.16
LTBR-209ENST00000541102 COL27A1Q8IZC6 1860 aaPredicted RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 CCDC78A2IDD5 438 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 GOLGA8MH3BSY2 632 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 CCL22O00626 93 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 PSMD3O43242 534 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 ZW10O43264 779 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 AVILO75366 819 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 MTX2O75431 263 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 DXOO77932 396 aaKnown RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 GAS8O95995 478 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 HGFP14210 728 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 HMGCLP35914 325 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 MAGEA6P43360 314 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 LMAN1P49257 510 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 PCBP4P57723 403 aaKnown RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 ERVPABLB-1P60509 514 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 CRADDP78560 199 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 POU6F1Q14863 301 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 TRADDQ15628 312 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 CCDC38Q502W7 563 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 PHF19Q5T6S3 580 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 RNASEH2BQ5TBB1 312 aaKnown RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 NKAIN2Q5VXU1 208 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 CRTC3Q6UUV7 619 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 C4orf22Q6V702 233 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 RAB11FIP2Q7L804 512 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 ADGRG6Q86SQ4 1221 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 ZNF761Q86XN6 746 aaPredicted RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 NOA1Q8NC60 698 aaKnown RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 ZNF248Q8NDW4 579 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 GDAP1Q8TB36 358 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 LIN37Q96GY3 246 aaPredicted RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 PRR11Q96HE9 360 aaPredicted RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 PPP1R2P1Q96PQ5 205 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 TRIM31Q9BZY9 425 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 SEMA6CQ9H3T2 930 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 ASCL3Q9NQ33 180 aa14.04□□□□□ -0.16
LTBR-209ENST00000541102 EIF2B3Q9NR50 452 aaKnown RBP14.04□□□□□ -0.16
LTBR-209ENST00000541102 HACD3Q9P035 362 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms