RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 SLC2A3P11169 496 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ITIH1P19827 911 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 LHX1P48742 406 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ECT2LQ008S8 904 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 POLD3Q15054 466 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-206ENST00000540367 IMPG1Q17R60 797 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 FAM98BQ52LJ0 330 aaKnown RBP11.12□□□□□ -0.63
CPT1A-206ENST00000540367 BRMS1LQ5PSV4 323 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 PIWIL3Q7Z3Z3 882 aaKnown RBP11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ANKRD13BQ86YJ7 626 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 LRRC49Q8IUZ0 686 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 HID1Q8IV36 788 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 DTWD1Q8N5C7 304 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 S100ZQ8WXG8 99 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 FEM1AQ9BSK4 669 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 DGCR6LQ9BY27 220 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 CSNK1G1Q9HCP0 422 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 SEMA4BQ9NPR2 832 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-206ENST00000540367 FAM118AQ9NWS6 357 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ZIM2Q9NZV7 527 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 SUN2Q9UH99 717 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 IPPQ9Y573 584 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 TIMM22Q9Y584 194 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-206ENST00000540367 PLXNB2O15031 1838 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 FAM234BA2RU67 622 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 RRN3P2A6NIE6 340 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 PTGESO14684 152 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 KDM1AO60341 852 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 KERAO60938 352 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 MMP3P08254 477 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 SMPD1P17405 629 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 CD86P42081 329 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 TPD52P55327 224 aaPredicted RBP11.12□□□□□ -0.63
CPT1A-206ENST00000540367 CTF1Q16619 201 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 DPY19L1Q2PZI1 675 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 PERM1Q5SV97 790 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 AGAP7PQ5VUJ5 663 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 EFL1Q7Z2Z2 1120 aaKnown RBP11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 CADM3Q8N126 398 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 TMEM86AQ8N2M4 240 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ITFG1Q8TB96 612 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 CASP10Q92851 521 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 SDCCAG3Q96C92 435 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ZNF599Q96NL3 588 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 MBOAT4Q96T53 435 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 MTRRQ9UBK8 725 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 NAALAD2Q9Y3Q0 740 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ST14Q9Y5Y6 855 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 ANKRD36A6QL64 1941 aa11.12□□□□□ -0.63
CPT1A-206ENST00000540367 SUPT3HB4E1H0 165 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 SNX2O60749 519 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 PEX11BO96011 259 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 ANXA6P08133 673 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 RPS17P08708 135 aaKnown RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 HOXD8P13378 290 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 NR4A1P22736 598 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 IL12AP29459 219 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 CCR1P32246 355 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 MTHFRP42898 656 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 ERVK-8P63133 956 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 CHRNB3Q05901 458 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 TOP3AQ13472 1001 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 MEP1AQ16819 746 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 CTU2Q2VPK5 515 aaKnown RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 PAN2Q504Q3 1202 aaKnown RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 ANKS6Q68DC2 871 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 PRR23BQ6ZRT6 265 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 FBXO39Q8N4B4 442 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 DPP10Q8N608 796 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 RTL3Q8N8U3 475 aaKnown RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 PIK3C3Q8NEB9 887 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 ZNF555Q8NEP9 628 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 PJA1Q8NG27 643 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 C17orf50Q8WW18 174 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 DNAJB3Q8WWF6 145 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 FCRL2Q96LA5 508 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 TMEM209Q96SK2 561 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 NT5MQ9NPB1 228 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 TMEM45AQ9NWC5 275 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 SPATA7Q9P0W8 599 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 DNMT3BQ9UBC3 853 aaKnown RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 CDH9Q9ULB4 789 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 SNX5Q9Y5X3 404 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 G3V2T6 193 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 XYLBO75191 536 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 CNTN5O94779 1100 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 CHEK2O96017 543 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 MMP2P08253 660 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 PCNAP12004 261 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 PCMT1P22061 227 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 KPNA1P52294 538 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 GP2P55259 537 aaKnown RBP11.11□□□□□ -0.63
CPT1A-206ENST00000540367 MAXP61244 160 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 CD47Q08722 323 aa11.11□□□□□ -0.63
CPT1A-206ENST00000540367 IQSEC1Q6DN90 963 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms