RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ATP6V1E2Q96A05 226 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF707Q96C28 371 aaPredicted RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NRBF2Q96F24 287 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 HSFY1Q96LI6 401 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CCDC138Q96M89 665 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PPP1R2P1Q96PQ5 205 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 SLC30A3Q99726 388 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 SLC29A1Q99808 456 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MRPL57Q9BQC6 102 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 GPATCH1Q9BRR8 931 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MROQ9BYG7 248 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 SHCBP1LQ9BZQ2 653 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 RHOJQ9H4E5 214 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 WDR55Q9H6Y2 383 aaPredicted RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MEAF6Q9HAF1 191 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 EML4Q9HC35 981 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PFDN4Q9NQP4 134 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ARHGEF38Q9NXL2 777 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CACNA2D2Q9NY47 1150 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PKD2L2Q9NZM6 624 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NCKIPSDQ9NZQ3 722 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 TJP2Q9UDY2 1190 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF639Q9UID6 485 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ZDHHC2Q9UIJ5 367 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PPT2Q9UMR5 302 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NDUFAF1Q9Y375 327 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MTF2Q9Y483 593 aaPredicted RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PCDHGA2Q9Y5H1 932 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PSAT1Q9Y617 370 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 DOCK8Q8NF50 2099 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 A0A087X1B8 175 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 MEIS3P2A8K0S8 358 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 E7ENX8 843 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 H3BMQ9 156 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SDHDO14521 159 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 NARSO43776 548 aaKnown RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 NRP2O60462 931 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ZBTB11O95625 1053 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 TOP3BO95985 862 aaKnown RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 PDGFRBP09619 1106 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 HOXB6P17509 224 aaKnown RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 PTPN2P17706 415 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 TFE3P19532 575 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ATP5F1P24539 256 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 FASP25445 335 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 GABRB3P28472 473 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 GNL1P36915 607 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SLC26A3P40879 764 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 TNFSF9P41273 254 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 GRIA1P42261 906 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 HALP42357 657 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 PKNOX1P55347 436 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ATP6V0D1P61421 351 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 RPS26P62854 115 aaKnown RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 GBE1Q04446 702 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ATP6AP1Q15904 470 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 DDR2Q16832 855 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 RGS21Q2M5E4 152 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 C15orf59Q2T9L4 293 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 PLEKHG6Q3KR16 790 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SEZ6Q53EL9 994 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 UBXN11Q5T124 520 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 KCTD11Q693B1 232 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 NCBP2-AS2Q69YL0 99 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 LCN8Q6JVE9 175 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ANKRD26P1Q6NSI1 321 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SCYL2Q6P3W7 929 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 NOTUMQ6P988 496 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 LILRA6Q6PI73 481 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 MTSS1LQ765P7 747 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 LINC00523Q86TU6 105 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 TBC1D21Q8IYX1 336 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 PLD6Q8N2A8 252 aaKnown RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SFRP1Q8N474 314 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 FAM169BQ8N8A8 192 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 FAM47BQ8NA70 645 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SUMF1Q8NBK3 374 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 PJA1Q8NG27 643 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 OR13F1Q8NGS4 319 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SPPL2BQ8TCT7 592 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 RAB2BQ8WUD1 216 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 SNRNP27Q8WVK2 155 aaKnown RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 S100ZQ8WXG8 99 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 VMP1Q96GC9 406 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ABHD17AQ96GS6 310 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF668Q96K58 619 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 UBXN10Q96LJ8 280 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF512Q96ME7 567 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 COG8Q96MW5 612 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 RDH12Q96NR8 316 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 FCRL3Q96P31 734 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-204ENST00000539847 AGAP3Q96P47 875 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 MYADMQ96S97 322 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF347Q96SE7 839 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 NELL2Q99435 816 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 CORO1BQ9BR76 489 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 ADI1Q9BV57 179 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 KIFC1Q9BW19 673 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 COLEC11Q9BWP8 271 aa7.61□□□□□ -1.19
CCDC60-204ENST00000539847 LRRC3Q9BY71 257 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms