RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ADGRE3Q9BY15 652 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 EPN3Q9H201 632 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 TCEAL2Q9H3H9 227 aaPredicted RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 LUC7LQ9NQ29 371 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 TUBD1Q9UJT1 453 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 SUV39H1O43463 412 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 CALCAP01258 141 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 AK4P27144 223 aaPredicted RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 ACVRL1P37023 503 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 GPR3P46089 330 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 SLMAPQ14BN4 828 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 PPP2R5EQ16537 467 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 TMEM71Q6P5X7 295 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 LYSMD3Q7Z3D4 306 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 ASB12Q8WXK4 309 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 NUDT22Q9BRQ3 303 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 HERPUD2Q9BSE4 406 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 CNPY3Q9BT09 278 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 SLC4A5Q9BY07 1137 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 VPS37BQ9H9H4 285 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 MRPL47Q9HD33 250 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 ASCL3Q9NQ33 180 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 IMP3Q9NV31 184 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 ABCB7O75027 752 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CDK14O94921 469 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ATP1A1P05023 1023 aaKnown RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 TROVE2P10155 538 aaKnown RBP eCLIP7.53□□□□□ -1.2
GNE-205ENST00000539815 UBL4AP11441 157 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ANKRD20A8PQ5CZ79 823 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 SCARA3Q6AZY7 606 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CLEC14AQ86T13 490 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 FAM20CQ8IXL6 584 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 NETO2Q8NC67 525 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 TNIP2Q8NFZ5 429 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 MRGPRX3Q96LB0 322 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CFAP57Q96MR6 1250 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.53□□□□□ -1.2
GNE-205ENST00000539815 NT5MQ9NPB1 228 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 TMCO1Q9UM00 188 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 TBC1D30Q9Y2I9 924 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 PRSS38A1L453 326 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 PRSS44E7EML9 344 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 EIF3HO15372 352 aaKnown RBP eCLIP7.53□□□□□ -1.2
GNE-205ENST00000539815 KCNJ13O60928 360 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 PIGNO95427 931 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ATP6V1G2O95670 118 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 LSM8O95777 96 aaKnown RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 CTPS1P17812 591 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 MX2P20592 715 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 IGFALSP35858 605 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 GARSP41250 739 aaKnown RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 POLD2P49005 469 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ABHD18Q0P651 414 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 WSCD2Q2TBF2 565 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 FAM180AQ6UWF9 173 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 LRRC49Q8IUZ0 686 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 MLKLQ8NB16 471 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ANKRD49Q8WVL7 239 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CPT1BQ92523 772 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 HSPH1Q92598 858 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 LENG8Q96PV6 779 aaPredicted RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 CPXM1Q96SM3 734 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 LGR4Q9BXB1 951 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 VPS16Q9H269 839 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CBX8Q9HC52 389 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 GPR83Q9NYM4 423 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ABI3Q9P2A4 366 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ZNF711Q9Y462 761 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 LIN7AO14910 233 aaPredicted RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 RAD51BO15315 384 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 IPO13O94829 963 aaKnown RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 NDUFA10O95299 355 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 LIFP15018 202 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CES1P23141 567 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 METAP1P53582 386 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ETF1P62495 437 aaKnown RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 PPP2R2AP63151 447 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CTBSQ01459 385 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CDC16Q13042 620 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 RAPSNQ13702 412 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 BRD3Q15059 726 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 NFIL3Q16649 462 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 INO80DQ53TQ3 878 aaPredicted RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 NKAIN2Q5VXU1 208 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 SPRED1Q7Z699 444 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 ZC3H18Q86VM9 953 aaKnown RBP7.53□□□□□ -1.2
GNE-205ENST00000539815 RELL1Q8IUW5 271 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 FAM217AQ8IXS0 508 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 PPFIBP2Q8ND30 876 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 CCDC110Q8TBZ0 833 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 OR1E3Q8WZA6 343 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 SLC39A13Q96H72 371 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 FAM83DQ9H4H8 585 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 STOML2Q9UJZ1 356 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 TP53TG5Q9Y2B4 290 aa7.53□□□□□ -1.2
GNE-205ENST00000539815 GCN1Q92616 2671 aaKnown RBP7.52□□□□□ -1.21
GNE-205ENST00000539815 GCATO75600 419 aa7.52□□□□□ -1.21
GNE-205ENST00000539815 LRIG2O94898 1065 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms