RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 GPR89BP0CG08 455 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 ZNF7P17097 686 aaPredicted RBP15.25■□□□□ 0.03
DDB1-216ENST00000539739 CA5AP35218 305 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 MPLP40238 635 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 NSG1P42857 185 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 CTBP1Q13363 440 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 SEMA3AQ14563 771 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 TYSND1Q2T9J0 566 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 LAYNQ6UX15 382 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 LDB1Q86U70 411 aaPredicted RBP15.25■□□□□ 0.03
DDB1-216ENST00000539739 DENND6AQ8IWF6 608 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 SLC22A18ASQ8N1D0 253 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 SUMF1Q8NBK3 374 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 CYTH2Q99418 400 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 OR2AG1Q9H205 316 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 FAM86C1Q9NVL1 165 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 INTS10Q9NVR2 710 aaKnown RBP15.25■□□□□ 0.03
DDB1-216ENST00000539739 TXNDC16Q9P2K2 825 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 KLQ9UEF7 1012 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 MOSPD1Q9UJG1 213 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 ANKRD6Q9Y2G4 727 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 TMEM98Q9Y2Y6 226 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 IGLV3-16A0A075B6K0 115 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 A0A1B0GVT2 93 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 TMEM202A6NGA9 273 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 FAM159BA6NKW6 160 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 F8W8V4 182 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 ABHD2P08910 425 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 ATP1B2P14415 290 aaPredicted RBP15.25■□□□□ 0.03
DDB1-216ENST00000539739 SLC1A2P43004 574 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 NXPH1P58417 271 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 ZNF648Q5T619 568 aaPredicted RBP15.25■□□□□ 0.03
DDB1-216ENST00000539739 ADGRG6Q86SQ4 1221 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 SLC26A11Q86WA9 606 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 CTAGE3PQ8IX95 158 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 C2CD4AQ8NCU7 369 aaPredicted RBP15.25■□□□□ 0.03
DDB1-216ENST00000539739 ZNF514Q96K75 400 aaPredicted RBP15.25■□□□□ 0.03
DDB1-216ENST00000539739 FUT8Q9BYC5 575 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 CLPBQ9H078 707 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 RMI1Q9H9A7 625 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 ATXN10Q9UBB4 475 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 SLC6A14Q9UN76 642 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 SLC17A4Q9Y2C5 497 aa15.25■□□□□ 0.03
DDB1-216ENST00000539739 UBA6A0AVT1 1052 aaPredicted RBP15.24■□□□□ 0.03
DDB1-216ENST00000539739 QSOX1O00391 747 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 PRMT5O14744 637 aaPredicted RBP15.24■□□□□ 0.03
DDB1-216ENST00000539739 LMNAP02545 664 aaKnown RBP15.24■□□□□ 0.03
DDB1-216ENST00000539739 CEACAM5P06731 702 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 BLKP51451 505 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 NAB1Q13506 487 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 KBTBD12Q3ZCT8 623 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 TRIM61Q5EBN2 209 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 SLC23A3Q6PIS1 610 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 PACS1Q6VY07 963 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 GALNT7Q86SF2 657 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 PARGQ86W56 976 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 LRRC6Q86X45 466 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 GIMAP7Q8NHV1 300 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 CCDC77Q9BR77 488 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 BOCQ9BWV1 1114 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 NUSAP1Q9BXS6 441 aaKnown RBP15.24■□□□□ 0.03
DDB1-216ENST00000539739 ACSS3Q9H6R3 686 aa15.24■□□□□ 0.03
DDB1-216ENST00000539739 FBXO6Q9NRD1 293 aaPredicted RBP15.24■□□□□ 0.03
DDB1-216ENST00000539739 MUC6Q6W4X9 2439 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 PRSS38A1L453 326 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 NUAK1O60285 661 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 OR1I1O60431 355 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 AP2A2O94973 939 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 S1PR4O95977 384 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 ZNF8P17098 575 aaPredicted RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 LEPRP48357 1165 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 POLD2P49005 469 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 SRP54P61011 504 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 PPARDQ03181 441 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 ILF2Q12905 390 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 FZD2Q14332 565 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 SLC29A2Q14542 456 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 KLHL38Q2WGJ6 581 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 KHDC1Q4VXA5 237 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 TPRG1LQ5T0D9 272 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 MARK2Q7KZI7 788 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 SPATS2Q86XZ4 545 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 PPM1NQ8N819 430 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 PNPLA1Q8N8W4 532 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 RASGEF1AQ8N9B8 481 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 UHMK1Q8TAS1 419 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 MIEF2Q96C03 454 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 CCDC68Q9H2F9 335 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 CYP4F12Q9HCS2 524 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 RABGEF1Q9UJ41 708 aa15.23■□□□□ 0.03
DDB1-216ENST00000539739 TNRC6BQ9UPQ9 1833 aaKnown RBP15.23■□□□□ 0.03
DDB1-216ENST00000539739 KHNYNO15037 678 aaKnown RBP15.22■□□□□ 0.03
DDB1-216ENST00000539739 RASGRP1O95267 797 aa15.22■□□□□ 0.03
DDB1-216ENST00000539739 TNFP01375 233 aa15.22■□□□□ 0.03
DDB1-216ENST00000539739 SYPP08247 313 aa15.22■□□□□ 0.03
DDB1-216ENST00000539739 OR56A5P0C7T3 313 aa15.22■□□□□ 0.03
DDB1-216ENST00000539739 RPS3P23396 243 aaKnown RBP eCLIP15.22■□□□□ 0.034e-7■■■□□ 19.1
DDB1-216ENST00000539739 CTSKP43235 329 aa15.22■□□□□ 0.03
DDB1-216ENST00000539739 CD151P48509 253 aa15.22■□□□□ 0.03
DDB1-216ENST00000539739 MPP1Q00013 466 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms