RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 GPX3P22352 226 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 GATMP50440 423 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 IL10RBQ08334 325 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 DNASE1L3Q13609 305 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PTPRRQ15256 657 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 DCP1BQ8IZD4 617 aaKnown RBP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PTGR2Q8N8N7 351 aaPredicted RBP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 C19orf60Q96EN9 201 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 SLC25A23Q9BV35 468 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 IFT80Q9P2H3 777 aaPredicted RBP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 GALPQ9UBC7 116 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 VPS51Q9UID3 782 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 SPO11Q9Y5K1 396 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 A0A0U1RQS6 177 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 TMEM247A6NEH6 219 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 SYNCRIPO60506 623 aaKnown RBP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PRAMEF11O60813 436 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 SERPINB7O75635 380 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 HGFP14210 728 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 ZNF37AP17032 561 aaPredicted RBP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 FSHRP23945 695 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PSMA4P25789 261 aaKnown RBP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 SLC6A4P31645 630 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 GGT5P36269 586 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 CDKN1CP49918 316 aaPredicted RBP12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PGS1Q32NB8 556 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 TMEM126BQ8IUX1 230 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PHYKPLQ8IUZ5 450 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 SLC22A9Q8IVM8 553 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 TMCO5AQ8N6Q1 288 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 LZICQ8WZA0 190 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 ABHD8Q96I13 439 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 FAR2Q96K12 515 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 CSF3RQ99062 836 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PADI4Q9UM07 663 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PCDHB5Q9Y5E4 795 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 FRMPD3Q5JV73 1810 aa12.46□□□□□ -0.41
SFSWAP-208ENST00000539506 PORP16435 677 aaPredicted RBP12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 SHMT2P34897 504 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 PBX3P40426 434 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 NFKB2Q00653 900 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 CTXN3Q4LDR2 81 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 RNF19BQ6ZMZ0 732 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 ATP6V0D2Q8N8Y2 350 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 ACDQ96AP0 544 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 BIRC8Q96P09 236 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 TRIB3Q96RU7 358 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 ATOH8Q96SQ7 321 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 ACOX2Q99424 681 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 NEURL2Q9BR09 285 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 ING2Q9H160 280 aa12.46□□□□□ -0.42
SFSWAP-208ENST00000539506 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 TMEM221A6NGB7 291 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM155AB1AL88 458 aaPredicted RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 GLP2RO95838 553 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 PRDX3P30048 256 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 BCAP31P51572 246 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 PAGE3Q5JUK9 113 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM171A1Q5VUB5 890 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM45BPQ6NSW5 357 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 RGMBQ6NW40 437 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC24A5Q71RS6 500 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 ABI1Q8IZP0 508 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM45AQ8TCE6 357 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 HM13Q8TCT9 377 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 GLT1D1Q96MS3 346 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 HEPHQ9BQS7 1158 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 HERC2P3Q9BVR0 1158 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 CCM2LQ9NUG4 571 aaPredicted RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 CNOT11Q9UKZ1 510 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 GREB1Q4ZG55 1949 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 TMEM88BA6NKF7 163 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 TMEM189-UBE2V1I3L0A0 370 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 ACOX3O15254 700 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 PRKACGP22612 351 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 PAX3P23760 479 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 HOXD9P28356 352 aaPredicted RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SUOXP51687 545 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 RAD23AP54725 363 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SFSWAPQ12872 951 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 NFATC3Q12968 1075 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 NFYCQ13952 458 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SPIDRQ14159 915 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 NFE2Q16621 373 aaPredicted RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC36A3Q495N2 470 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 OR7D4Q8NG98 312 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 EXOC2Q96KP1 924 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 CYP2S1Q96SQ9 504 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC30A3Q99726 388 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 POLR1EQ9GZS1 481 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SMURF2Q9HAU4 748 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 INTS7Q9NVH2 962 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 UTS2RQ9UKP6 389 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 SQORQ9Y6N5 450 aa12.45□□□□□ -0.42
SFSWAP-208ENST00000539506 BMP2P12643 396 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TCF3P15923 654 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC6A2P23975 617 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms