RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KRBOX4Q5JUW0 171 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TSTD2Q5T7W7 516 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SERTAD4-AS1Q5TG53 156 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PLA2G4FQ68DD2 849 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 FCRLBQ6BAA4 426 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 HEPHL1Q6MZM0 1159 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PAPD4Q6PIY7 484 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SLC2A7Q6PXP3 512 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 IL27RAQ6UWB1 636 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 LRIG3Q6UXM1 1119 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SERPINA11Q86U17 422 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GALNT13Q8IUC8 556 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ERC1Q8IUD2 1116 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CPXM2Q8N436 756 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 RSPH1Q8WYR4 309 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DDB2Q92466 427 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 VPS33AQ96AX1 596 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GRAMD2BQ96HH9 432 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 C1orf74Q96LT6 269 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MSTO1Q9BUK6 570 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 NPFFR1Q9GZQ6 430 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 KCNK15Q9H427 330 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GOLPH3LQ9H4A5 285 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 OPA3Q9H6K4 179 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PNRC2Q9NPJ4 139 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZBTB40Q9NUA8 1239 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 OSER1Q9NX31 292 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZHX1Q9UKY1 873 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 B3GALT5Q9Y2C3 310 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MAB21L2Q9Y586 359 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CKAP5Q14008 2032 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TRBV5-3A0A0A0MS03 114 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 C13orf42A0A1B0GVH6 325 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 A0A1W2PPI3 338 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PPP6CO00743 305 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PRRG2O14669 202 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 LDB2O43679 373 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 FZD7O75084 574 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ATG13O75143 517 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MED24O75448 989 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CREG1O75629 220 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 RNF8O76064 485 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 STBD1O95210 358 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZWINTO95229 277 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SPARCP09486 303 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ARSBP15848 533 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CTPS1P17812 591 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GM2AP17900 193 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TRIM21P19474 475 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PTAFRP25105 342 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CDKN1AP38936 164 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CCT8P50990 548 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CCR4P51679 360 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SNX16P57768 344 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SSTP61278 116 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DRP2Q13474 957 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CAPSQ13938 189 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 LPIN1Q14693 890 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 KIR2DS3Q14952 304 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZXDCQ2QGD7 858 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DCST2Q5T1A1 773 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PXDC1Q5TGL8 231 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 C11orf87Q6NUJ2 197 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SLC30A6Q6NXT4 461 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CAVIN1Q6NZI2 390 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 NEK5Q6P3R8 708 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 KLHL35Q6PF15 583 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PARM1Q6UWI2 310 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 LCTLQ6UWM7 567 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF704Q6ZNC4 412 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DCDC5Q6ZRR9 648 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GET4Q7L5D6 327 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GLRX5Q86SX6 157 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GGNQ86UU5 652 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 C17orf64Q86WR6 236 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CCDC191Q8NCU4 936 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CEP76Q8TAP6 659 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ACTRT2Q8TDY3 377 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GDPD5Q8WTR4 605 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM186Q96B77 213 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF419Q96HQ0 510 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 FER1L6-AS2Q96M78 137 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SIGLEC11Q96RL6 698 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CRAMP1Q96RY5 1269 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MEIS3Q99687 375 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF747Q9BV97 191 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF350Q9GZX5 532 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 HIPK3Q9H422 1215 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TSPY26PQ9H489 355 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SMARCAD1Q9H4L7 1026 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MVB12BQ9H7P6 319 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 HOXC10Q9NYD6 342 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ERAP1Q9NZ08 941 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 NDRG3Q9UGV2 375 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ATP10AO60312 1499 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SMCHD1A6NHR9 2005 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 FLT1P17948 1338 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 LOC102723996A0A087X1L8 192 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms