RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 VIPP01282 170 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 SLC4A1P02730 911 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 ZNF7P17097 686 aaPredicted RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 BPIP17213 487 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 ITGB6P18564 788 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 PTPN3P26045 913 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 MAPK9P45984 424 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 NOP2P46087 812 aaKnown RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 CSRP3P50461 194 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 HADHBP55084 474 aaKnown RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 MC1RQ01726 317 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 ABHD18Q0P651 414 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 GTF2H3Q13889 308 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 TAZQ16635 292 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 CRTC2Q53ET0 693 aaPredicted RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 CRTC3Q6UUV7 619 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 ABRAXAS1Q6UWZ7 409 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 NPNTQ6UXI9 565 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 TMEM26Q6ZUK4 368 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 ESX1Q8N693 406 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 TFB1MQ8WVM0 346 aaKnown RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 JPH3Q8WXH2 748 aaPredicted RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 C9orf72Q96LT7 481 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 TEKT5Q96M29 485 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 VAT1Q99536 393 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 TBC1D10AQ9BXI6 508 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 SPRY4Q9C004 299 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 SLC25A18Q9H1K4 315 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 ZNF768Q9H5H4 540 aaKnown RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 NHEJ1Q9H9Q4 299 aaPredicted RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 GPN2Q9H9Y4 310 aaPredicted RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 PRDM8Q9NQV8 689 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 SPTLC3Q9NUV7 552 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.52□□□□□ -1.05
DDB1-212ENST00000538470 HACD3Q9P035 362 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 FAM153AQ9UHL3 310 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 SHOC2Q9UQ13 582 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 KLHL33A6NCF5 533 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 A8MU76 341 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 SUV39H1O43463 412 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 CDK14O94921 469 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 MT-CYBP00156 380 aaPredicted RBP8.51□□□□□ -1.05
DDB1-212ENST00000538470 EPOP01588 193 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 PIRTP0C851 137 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 HLA-DPA1P20036 260 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 IDSP22304 550 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 HMGCLP35914 325 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 CDKN2BP42772 138 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 CAPZBP47756 277 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 POLE2P56282 527 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 DYNLT1P63172 113 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 CYP4F2P78329 520 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 KCNC4Q03721 635 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 DMPKQ09013 629 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 CDC20Q12834 499 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 KCNAB2Q13303 367 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 CLCA4Q14CN2 919 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 PLA2G4EQ3MJ16 856 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 KDELC1Q6UW63 502 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 MFSD7Q6UXD7 560 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 KDELC2Q7Z4H8 507 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 PRSS42Q7Z5A4 293 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 TRAPPC5Q8IUR0 188 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 DDHD1Q8NEL9 900 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 SPATA22Q8NHS9 363 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 BRSK1Q8TDC3 778 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 RNF25Q96BH1 459 aaPredicted RBP8.51□□□□□ -1.05
DDB1-212ENST00000538470 RBM41Q96IZ5 413 aaKnown RBP8.51□□□□□ -1.05
DDB1-212ENST00000538470 CHP1Q99653 195 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 RAB33BQ9H082 229 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 OGFRQ9NZT2 677 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 KLHL3Q9UH77 587 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 MAST4O15021 2626 aa8.51□□□□□ -1.05
DDB1-212ENST00000538470 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 LOC285095A0A1B0GVY8 99 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 GOLGA6L3A6NEY3 463 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 HACD1B0YJ81 288 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 PMPCBO75439 489 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 AMD1P17707 334 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 NFKB1P19838 968 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 COMTP21964 271 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 SPAM1P38567 509 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 SLC19A1P41440 591 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 STAT5AP42229 794 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 HALP42357 657 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 CCR10P46092 362 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 GFERP55789 205 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 WASHC5Q12768 1159 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 MPP3Q13368 585 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ITGA9Q13797 1035 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 IL11RAQ14626 422 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 PPP2R5EQ16537 467 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ATP13A5Q4VNC0 1218 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 KHDC1Q4VXA5 237 aaKnown RBP8.5□□□□□ -1.05
DDB1-212ENST00000538470 TFDP3Q5H9I0 405 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 LDLRAP1Q5SW96 308 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ZNF648Q5T619 568 aaPredicted RBP8.5□□□□□ -1.05
DDB1-212ENST00000538470 SPOCD1Q6ZMY3 1216 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 GLT6D1Q7Z4J2 308 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms