RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TMEM117Q9H0C3 514 aa5.63□□□□□ -1.51
CLIP1-207ENST00000536634 TMEM161AQ9NX61 479 aa5.63□□□□□ -1.51
CLIP1-207ENST00000536634 MAP3K20Q9NYL2 800 aaKnown RBP5.63□□□□□ -1.51
CLIP1-207ENST00000536634 SPG21Q9NZD8 308 aa5.63□□□□□ -1.51
CLIP1-207ENST00000536634 WNT16Q9UBV4 365 aa5.63□□□□□ -1.51
CLIP1-207ENST00000536634 PLEKHB1Q9UF11 243 aaPredicted RBP5.63□□□□□ -1.51
CLIP1-207ENST00000536634 MAD2L2Q9UI95 211 aa5.63□□□□□ -1.51
CLIP1-207ENST00000536634 F5P12259 2224 aa5.63□□□□□ -1.51
CLIP1-207ENST00000536634 MYH15Q9Y2K3 1946 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 NAV2Q8IVL1 2488 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 RPS10-NUDT3A0A1W2PQS6 291 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 RRN3P2A6NIE6 340 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 FAM90A8PA6NJQ4 464 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 BECN2A8MW95 431 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 KLRF2D3W0D1 207 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 SPTLC2O15270 562 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 DDAH2O95865 285 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 HLA-DQA2P01906 255 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 CENPBP07199 599 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-207ENST00000536634 FAM90A13PP0C7W8 464 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 FAM90A24PP0C7X0 464 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 PCP11498 1178 aaKnown RBP5.62□□□□□ -1.51
CLIP1-207ENST00000536634 CDKN2AP42771 156 aaKnown RBP5.62□□□□□ -1.51
CLIP1-207ENST00000536634 METAP2P50579 478 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLIP1-207ENST00000536634 RPS6KA3P51812 740 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 MVDP53602 400 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 PGGT1BP53609 377 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 SELENOVP59797 346 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 KRTAP10-9P60411 292 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 TRAF1Q13077 416 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 THOC5Q13769 683 aaKnown RBP5.62□□□□□ -1.51
CLIP1-207ENST00000536634 WTAPQ15007 396 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 LETM2Q2VYF4 491 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 SYTL3Q4VX76 610 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 RUNDC3AQ59EK9 446 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 C20orf194Q5TEA3 1177 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 TMEM71Q6P5X7 295 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 Q6ZTK2 550 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 DPP10Q8N608 796 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 OIT3Q8WWZ8 545 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 SEPT1Q8WYJ6 367 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 MYADMQ96S97 322 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 CADM1Q9BY67 442 aaKnown RBP5.62□□□□□ -1.51
CLIP1-207ENST00000536634 MYLK2Q9H1R3 596 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 SMARCAD1Q9H4L7 1026 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 DCTPP1Q9H773 170 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 KIF17Q9P2E2 1029 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 RAP2CQ9Y3L5 183 aa5.62□□□□□ -1.51
CLIP1-207ENST00000536634 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 STX16-NPEPL1H3BU86 382 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 I6L893 689 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 STX16O14662 325 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 MEIS2O14770 477 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 TMCC1O94876 653 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 TK1P04183 234 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 UNGP13051 313 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 CHRNB2P17787 502 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 MX1P20591 662 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 PRKCHP24723 683 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 CCKARP32238 428 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 AARSP49588 968 aaKnown RBP eCLIP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 MCM2P49736 904 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 RASSF2P50749 326 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 CLCN4P51793 760 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 ARHGAP8P85298 464 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 PTPN14Q15678 1187 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 GRAMD1BQ3KR37 738 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 MCMDC2Q4G0Z9 681 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 TSSK4Q6SA08 328 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 TRIM74Q86UV6 250 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 TRIM73Q86UV7 250 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 IQCA1Q86XH1 822 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 FAM185AQ8N0U4 392 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 NME8Q8N427 588 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 NKAPQ8N5F7 415 aaKnown RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 SCAIQ8N9R8 606 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 GABPB2Q8TAK5 448 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 FAR1Q8WVX9 515 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 PIBF1Q8WXW3 757 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 SDCCAG3Q96C92 435 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 LYZL4Q96KX0 146 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 FRG2BQ96QU4 278 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 RNF41Q9H4P4 317 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 PLAC1Q9HBJ0 212 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 KRCC1Q9NPI7 259 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 EPS15L1Q9UBC2 864 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 ICKQ9UPZ9 632 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 OSGIN2Q9Y236 505 aa5.61□□□□□ -1.51
CLIP1-207ENST00000536634 MTF2Q9Y483 593 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.61□□□□□ -1.51
CLIP1-207ENST00000536634 RALGAPA1Q6GYQ0 2036 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 CLUHO75153 1309 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 STMND1H3BQB6 276 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 CCNT1O60563 726 aaKnown RBP5.6□□□□□ -1.51
CLIP1-207ENST00000536634 VTNP04004 478 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 DHRS4L1P0CG22 281 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 RFX2P48378 723 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 ACTR2P61160 394 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 CSTF1Q05048 431 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms