RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SHMT1P34896 483 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PIGAP37287 484 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GLRBP48167 497 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CCT3P49368 545 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 CLK1P49759 484 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC7A2P52569 658 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TPD52P55327 224 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 HSD17B7P56937 341 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 UBXN2AP68543 259 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 NAB1Q13506 487 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SELPLGQ14242 412 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 KCNJ11Q14654 390 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RBMS2Q15434 407 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 SMN1Q16637 294 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 FAM26DQ5JW98 314 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GLRA4Q5JXX5 417 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SEL1L3Q68CR1 1132 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 LAMTOR1Q6IAA8 161 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZNF544Q6NX49 715 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 DENND1BQ6P3S1 775 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 BRAT1Q6PJG6 821 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 LRFN4Q6PJG9 635 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 EPGNQ6UW88 154 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 STRA8Q7Z7C7 330 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PCGF5Q86SE9 256 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC26A11Q86WA9 606 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ERO1BQ86YB8 467 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 WDR49Q8IV35 697 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLFN12Q8IYM2 578 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PGAM4Q8N0Y7 254 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PDIK1LQ8N165 341 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 AFAP1L2Q8N4X5 818 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 MYCT1Q8N699 235 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 MINDY2Q8NBR6 621 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 DYNC2LI1Q8TCX1 351 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZNF384Q8TF68 577 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 HEXDCQ8WVB3 486 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PTERQ96BW5 349 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TEKT5Q96M29 485 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 LINC00052Q96N35 136 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 STRA6Q9BX79 667 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PITHD1Q9GZP4 211 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 DHX35Q9H5Z1 703 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 LRRC4Q9HBW1 653 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 EHD3Q9NZN3 535 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 FNIP2Q9P278 1114 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ERVK-18Q9QC07 812 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 EIF3KQ9UBQ5 218 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 IPO11Q9UI26 975 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZDHHC2Q9UIJ5 367 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 FBXO10Q9UK96 956 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 FBXO5Q9UKT4 447 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGA2Q9Y5H1 932 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ACTL7AQ9Y615 435 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 COPG1Q9Y678 874 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZNFX1Q9P2E3 1918 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZFC3H1O60293 1989 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 CYP3A7-CYP3A51PA0A087WV96 503 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 LOC100506127A0A0U1RQW1 187 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CCDC78A2IDD5 438 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 HACD1B0YJ81 288 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 C6orf229H3BNL8 230 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 H3BQ06 376 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 BTN3A3O00478 584 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZBTB5O15062 677 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TO15178 435 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 OGTO15294 1046 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CHMP2AO43633 222 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 OR2B3O76000 313 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CIAO1O76071 339 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 MTA2O94776 668 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ALDOAP04075 364 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLURP2P0DP57 97 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TSPAN8P19075 237 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CRHBPP24387 322 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CYP3A7P24462 503 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SSTR2P30874 369 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 MAN1A1P33908 653 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 NUDT1P36639 197 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CAPGP40121 348 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GYG1P46976 350 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC12A3P55017 1021 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 EMX1Q04741 257 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 PCDH1Q08174 1060 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 INCA1Q0VD86 236 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 BST2Q10589 180 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 OLIG2Q13516 323 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TAF1CQ15572 869 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 DGUOKQ16854 277 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 LRRC26Q2I0M4 334 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PARP15Q460N3 678 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TRIM60Q495X7 471 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RAB6CQ53S08 254 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CCNYL2Q5T2Q4 361 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 METTL11BQ5VVY1 283 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TYW3Q6IPR3 259 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 LAIR2Q6ISS4 152 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ATRAIDQ6UW56 229 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 HHIPL2Q6UWX4 724 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 C17orf99Q6UX52 265 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms