RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 C2orf15Q8WU43 125 aaKnown RBP17.8■□□□□ 0.44
RAB40C-203ENST00000535977 ZNF347Q96SE7 839 aa17.8■□□□□ 0.44
RAB40C-203ENST00000535977 MAGEH1Q9H213 219 aa17.8■□□□□ 0.44
RAB40C-203ENST00000535977 ALG9Q9H6U8 611 aa17.8■□□□□ 0.44
RAB40C-203ENST00000535977 CLIC3O95833 236 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 FGF4P08620 206 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 CCND3P30281 292 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 GRSF1Q12849 480 aaKnown RBP eCLIP17.79■□□□□ 0.441e-7■■■■□ 24.1
RAB40C-203ENST00000535977 TRIM32Q13049 653 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 DNASE1L3Q13609 305 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 TRIM25Q14258 630 aaKnown RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 CHST15Q7LFX5 561 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 ATAD1Q8NBU5 361 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 LILRB4Q8NHJ6 448 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 TBATAQ96M53 351 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 INTS10Q9NVR2 710 aaKnown RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 TMEM161AQ9NX61 479 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 SAC3D1A6NKF1 404 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 TIPRLO75663 272 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 SUPT7LO94864 414 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 NKX2-5P52952 324 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 STX1BP61266 288 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 LRP8Q14114 963 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 IHHQ14623 411 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 INAVAQ3KP66 663 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 AGKQ53H12 422 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 ARHGAP39Q9C0H5 1083 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 MUC3BQ9H195 1237 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 TFB2MQ9H5Q4 396 aaKnown RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 ELAC1Q9H777 363 aaKnown RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 SYTL2Q9HCH5 934 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 PCDHGA7Q9Y5G6 932 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 MRPL42Q9Y6G3 142 aaKnown RBP17.79■□□□□ 0.44
RAB40C-203ENST00000535977 FRMPD3Q5JV73 1810 aa17.79■□□□□ 0.44
RAB40C-203ENST00000535977 DYTNA2CJ06 578 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 NDST3O95803 873 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 TBX18O95935 607 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 GOT2P00505 430 aaKnown RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ALOX5P09917 674 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ENDOUP21128 410 aaKnown RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 C1QTNF8P60827 252 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 GPR17Q13304 367 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 TMEM207Q6UWW9 146 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CYP2R1Q6VVX0 501 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 GK5Q6ZS86 529 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 LARP4Q71RC2 724 aaKnown RBP eCLIP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ADI1Q9BV57 179 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CACNA2D2Q9NY47 1150 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 MARCH4Q9P2E8 410 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 FIS1Q9Y3D6 152 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 PCDHGA3Q9Y5H0 932 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 BBIP1A8MTZ0 92 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 F5H5T6 163 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ZDHHC11BP0C7U3 371 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 PRKAR2AP13861 404 aaKnown RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CD1DP15813 335 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 TACR2P21452 398 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CES1P23141 567 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ACLYP53396 1101 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 NME5P56597 212 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 PRKCZQ05513 592 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 UNC50Q53HI1 259 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ABHD11Q8NFV4 315 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 OR4L1Q8NH43 312 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 SH3YL1Q96HL8 342 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CEP295NLQ96MC4 621 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 UHRF1Q96T88 793 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CATSPERZQ9NTU4 200 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 KLQ9UEF7 1012 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ARIH1Q9Y4X5 557 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CLDN25C9JDP6 229 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 H7C4K7 107 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CHRNB1P11230 501 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 TGM1P22735 817 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 SLC7A1P30825 629 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 APLP1P51693 650 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 PLK1P53350 603 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 IFITM3Q01628 133 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ELAVL2Q12926 359 aaKnown RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ZNF846Q147U1 533 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 REP15Q6BDI9 236 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 PCDH20Q8N6Y1 951 aaKnown RBP17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ANKFN1Q8N957 763 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 PDPRQ8NCN5 879 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 FAM110BQ8TC76 370 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 BLOC1S5Q8TDH9 187 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ROPN1LQ96C74 230 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 TCF12Q99081 682 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 PDFQ9HBH1 243 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 SPAG4Q9NPE6 437 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 CRYL1Q9Y2S2 319 aa17.78■□□□□ 0.44
RAB40C-203ENST00000535977 ENO2P09104 434 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-203ENST00000535977 YAP1P46937 504 aaKnown RBP17.77■□□□□ 0.44
RAB40C-203ENST00000535977 TMBIM6P55061 237 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 TYSND1Q2T9J0 566 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 IRAK1BP1Q5VVH5 260 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 TRAF7Q6Q0C0 670 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 ABI1Q8IZP0 508 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 CBR4Q8N4T8 237 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms