RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 CD1CP29017 333 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 CETN2P41208 172 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 INHBCP55103 352 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 XIAPP98170 497 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 C16orf72Q14CZ0 275 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 KCTD19Q17RG1 926 aaPredicted RBP16.16■□□□□ 0.18
ATL3-202ENST00000535789 PAPD7Q5XG87 772 aaKnown RBP16.16■□□□□ 0.18
ATL3-202ENST00000535789 SLC13A5Q86YT5 568 aaPredicted RBP16.16■□□□□ 0.18
ATL3-202ENST00000535789 TAB3Q8N5C8 712 aaPredicted RBP16.16■□□□□ 0.18
ATL3-202ENST00000535789 GLIS1Q8NBF1 620 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 TTC13Q8NBP0 860 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 DDHD1Q8NEL9 900 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 OR4K2Q8NGD2 314 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 WDR36Q8NI36 951 aaKnown RBP16.16■□□□□ 0.18
ATL3-202ENST00000535789 DTX3LQ8TDB6 740 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 UBE2Q2Q8WVN8 375 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 GRAMD1AQ96CP6 724 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 SLC46A1Q96NT5 459 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 RRAGDQ9NQL2 400 aaPredicted RBP16.16■□□□□ 0.18
ATL3-202ENST00000535789 LHX6Q9UPM6 363 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 IGHV1OR21-1A0A087WYE8 117 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 RHPN2P1A8MT19 583 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 GPR89AB7ZAQ6 455 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 LDB2O43679 373 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 PRAMEF1O95521 474 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 GPR89BP0CG08 455 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 F3P13726 295 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 BRAFP15056 766 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 ITIH1P19827 911 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 ALDH4A1P30038 563 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 ACTN2P35609 894 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 ETV5P41161 510 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 CLCNKAP51800 687 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 PEX6Q13608 980 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 TAF1AQ15573 450 aaPredicted RBP16.15■□□□□ 0.18
ATL3-202ENST00000535789 AMZ1Q400G9 498 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 GPRC6AQ5T6X5 926 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 IYDQ6PHW0 289 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 FOXR1Q6PIV2 292 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 LRRTM4Q86VH4 590 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 RASGEF1AQ8N9B8 481 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 C1orf54Q8WWF1 131 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 FGF11Q92914 225 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 ZNF578Q96N58 590 aaPredicted RBP16.15■□□□□ 0.18
ATL3-202ENST00000535789 TIMM29Q9BSF4 260 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 ARNT2Q9HBZ2 717 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 KLC4Q9NSK0 619 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 SMOXQ9NWM0 555 aa16.15■□□□□ 0.18
ATL3-202ENST00000535789 PIH1D1Q9NWS0 290 aaKnown RBP16.15■□□□□ 0.18
ATL3-202ENST00000535789 AAR2Q9Y312 384 aaKnown RBP16.15■□□□□ 0.18
ATL3-202ENST00000535789 SNRNP200O75643 2136 aaKnown RBP16.15■□□□□ 0.18
ATL3-202ENST00000535789 PRAMEF33A0A0G2JMD5 474 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 SGTAO43765 313 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 SNX2O60749 519 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 STK10O94804 968 aaKnown RBP16.14■□□□□ 0.17
ATL3-202ENST00000535789 CPNE6O95741 557 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 ETS1P14921 441 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 ZNF7P17097 686 aaPredicted RBP16.14■□□□□ 0.17
ATL3-202ENST00000535789 GPR3P46089 330 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 UBE2IP63279 158 aaKnown RBP16.14■□□□□ 0.17
ATL3-202ENST00000535789 TMEM115Q12893 351 aaPredicted RBP16.14■□□□□ 0.17
ATL3-202ENST00000535789 RPS6KA1Q15418 735 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 PARP6Q2NL67 630 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 MAP9Q49MG5 647 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 SEL1L2Q5TEA6 688 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 ARHGEF18Q6ZSZ5 1173 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 USP53Q70EK8 1073 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 CLEC14AQ86T13 490 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 SPACA3Q8IXA5 215 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 RCBTB1Q8NDN9 531 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 ZNF592Q92610 1267 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 PMEPA1Q969W9 287 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 DNAJC16Q9Y2G8 782 aa16.14■□□□□ 0.17
ATL3-202ENST00000535789 IGHV5-10-1A0A0J9YXX1 117 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 AGAP14A8MT82 685 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 PLD2O14939 933 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 KMOO15229 486 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 STX7O15400 261 aaKnown RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 VEGFDO43915 354 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 CDK14O94921 469 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 TNFSF15O95150 251 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 PRSS56P0CW18 603 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 LPOP22079 712 aaPredicted RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 PCBP4P57723 403 aaKnown RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 ERVPABLB-1P60509 514 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 HHEXQ03014 270 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 TLE3Q04726 772 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 PRPSAP1Q14558 356 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 SEPT7Q16181 437 aaKnown RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 INSCQ1MX18 579 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 FAM83HQ6ZRV2 1179 aaPredicted RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 RAB11FIP2Q7L804 512 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 KIF18AQ8NI77 898 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 BRSK1Q8TDC3 778 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 NAF1Q96HR8 494 aaKnown RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 CCDC74BQ96LY2 380 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 TMEM74Q96NL1 305 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 FERMT1Q9BQL6 677 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 OSGEPL1Q9H4B0 414 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms