RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FOCADQ5VW36 1801 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 TARSL2A2RTX5 802 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM221A6NGB7 291 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 MYO1GB0I1T2 1018 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF814B7Z6K7 855 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 H3BNX3 289 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 M0R296 226 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 OVOL3O00110 214 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 WDR46O15213 610 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 BCAT2O15382 392 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SEC14L5O43304 696 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ITM2AO43736 263 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 TACC1O75410 805 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CNMDO75829 334 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 FLOT1O75955 427 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 NDUFB8O95169 186 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 GH2P01242 217 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 RB1P06400 928 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 MMP2P08253 660 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CHRNB1P11230 501 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 KRT10P13645 584 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF182P17025 639 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 NAGAP17050 411 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 HOXD9P28356 352 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 GGT5P36269 586 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 PEX5P50542 639 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 OLR1P78380 273 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ADORA2A-AS1P86434 159 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 FAM27E3Q08E93 113 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SIGLEC14Q08ET2 396 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 GPR18Q14330 331 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 LPIN1Q14693 890 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 DRAP1Q14919 205 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 RABEP1Q15276 862 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ADIPOQQ15848 244 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 TSTQ16762 297 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 USP41Q3LFD5 358 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CCDC158Q5M9N0 1113 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 HAUS3Q68CZ6 603 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 TXNDC8Q6A555 127 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ITPRIPL1Q6GPH6 555 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 METTL2BQ6P1Q9 378 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CYP20A1Q6UW02 462 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CRELD2Q6UXH1 353 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 TRILQ7L0X0 811 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF575Q86XF7 245 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 EPHX4Q8IUS5 362 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 WDR63Q8IWG1 891 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CADM3Q8N126 398 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 FRMD1Q8N878 549 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 BEST2Q8NFU1 509 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CADM4Q8NFZ8 388 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CEP76Q8TAP6 659 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SCFD2Q8WU76 684 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SLC25A28Q96A46 364 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 NSUN4Q96CB9 384 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 MRPL38Q96DV4 380 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 METTL2AQ96IZ6 378 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 FCRL4Q96PJ5 515 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 WDR77Q9BQA1 342 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 NTPCRQ9BSD7 190 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 C1QTNF7Q9BXJ2 289 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 IFIH1Q9BYX4 1025 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 FRMD8Q9BZ67 464 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 UPF3AQ9H1J1 476 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 BICC1Q9H694 974 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 PLEKHA5Q9HAU0 1116 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 IL21RQ9HBE5 538 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 FBRSL1Q9HCM7 1045 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 WDR6Q9NNW5 1121 aaKnown RBP3.36□□□□□ -1.87
SNHG1-202ENST00000535689 ELOVL5Q9NYP7 299 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 NLKQ9UBE8 527 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 HDAC6Q9UBN7 1215 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 PNMA2Q9UL42 364 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SQORQ9Y6N5 450 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SCINQ9Y6U3 715 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 NLRC5Q86WI3 1866 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 RAD50Q92878 1312 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SYNRGQ9UMZ2 1314 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 MYH7BA7E2Y1 1941 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 SCN5AQ14524 2016 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 CACNA1GO43497 2377 aa3.36□□□□□ -1.87
SNHG1-202ENST00000535689 RALGAPA2Q2PPJ7 1873 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 A0A1B0GVM2 712 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 WDR91A4D1P6 747 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 FAM90A10PA6NDY2 464 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 PGPEP1LA6NFU8 196 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 CGB1A6NKQ9 187 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 MPHOSPH10O00566 681 aaKnown RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 AP3D1O14617 1153 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 SLC25A17O43808 307 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 ATP2C2O75185 946 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GPC4O75487 556 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GAGE7O76087 117 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 EPN2O95208 641 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 TBX18O95935 607 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 EIF2S1P05198 315 aaKnown RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GAGE12FP0CL80 117 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GAGE12GP0CL81 117 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GAGE12IP0CL82 117 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms