RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■□□□ 12
PHRF1-206ENST00000534320 ENOPH1Q9UHY7 261 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 SEC24AO95486 1093 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 PRDX6P30041 224 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 TOP3AQ13472 1001 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-206ENST00000534320 INTS11Q5TA45 600 aaKnown RBP17.09■□□□□ 0.33
PHRF1-206ENST00000534320 MSANTD2Q6P1R3 559 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 CHMP1BQ7LBR1 199 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 DPP10Q8N608 796 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 EHD3Q9NZN3 535 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 DUSP12Q9UNI6 340 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 AOC2O75106 756 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-206ENST00000534320 FBXO48Q5FWF7 155 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF438Q7Z4V0 828 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 SERPINA9Q86WD7 417 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 CHPFQ8IZ52 775 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 NMUR1Q9HB89 426 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 ESR1P03372 595 aa17.08■□□□□ 0.33
PHRF1-206ENST00000534320 GSSP48637 474 aa17.08■□□□□ 0.33
PHRF1-206ENST00000534320 CPSF7Q8N684 471 aaKnown RBP17.08■□□□□ 0.33
PHRF1-206ENST00000534320 INTS10Q9NVR2 710 aaKnown RBP17.08■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF624Q9P2J8 865 aaPredicted RBP17.08■□□□□ 0.33
PHRF1-206ENST00000534320 DEC1Q9P2X7 70 aa17.08■□□□□ 0.33
PHRF1-206ENST00000534320 FBXO10Q9UK96 956 aa17.08■□□□□ 0.33
PHRF1-206ENST00000534320 UBXN8O00124 270 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 STK16O75716 305 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 C8AP07357 584 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 PTGER3P43115 390 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ZNF846Q147U1 533 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 AP5B1Q2VPB7 878 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ATXN7L2Q5T6C5 722 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 PQLC1Q8N2U9 271 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 PROX1Q92786 737 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 KIFC1Q9BW19 673 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 CADM1Q9BY67 442 aaKnown RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 GKN1Q9NS71 199 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 STOML2Q9UJZ1 356 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 RPS6KA6Q9UK32 745 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 PSMD13Q9UNM6 376 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ASF1AQ9Y294 204 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 LRATO95237 230 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 FGD3Q5JSP0 725 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 AKAP14Q86UN6 197 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 PGAM4Q8N0Y7 254 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 SMG8Q8ND04 991 aaKnown RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 PANX1Q96RD7 426 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 OSBPL6Q9BZF3 934 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 NOL11Q9H8H0 719 aaKnown RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 IPPKQ9H8X2 491 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ZNF490Q9ULM2 529 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ENTPD4Q9Y227 616 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 DNAJC25-GNG10A0A024R161 153 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 PABPC1P11940 636 aaKnown RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 IL12AP29459 219 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ADSLP30566 484 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 GNPDA1P46926 289 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 TSNQ15631 228 aaKnown RBP17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ADGRF1Q5T601 910 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 ITCHQ96J02 903 aa17.08■□□□□ 0.32
PHRF1-206ENST00000534320 CHD4Q14839 1912 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 CCDC162PA2VCL2 907 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 J3KR12 359 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 ITPKAP23677 461 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 RPL3P39023 403 aaKnown RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 GABRQQ9UN88 632 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 YIPF1Q9Y548 306 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 PTGES3LE9PB15 166 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 RFXANKO14593 260 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 DYRK3O43781 588 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 TLE2Q04725 743 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 CBX3Q13185 183 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 QPRTQ15274 297 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 CRTC3Q6UUV7 619 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 DNAJB7Q7Z6W7 309 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 SIGLEC10Q96LC7 697 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 EBF4Q9BQW3 602 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 TLE6Q9H808 572 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 TIMMDC1Q9NPL8 285 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 POLR3BQ9NW08 1133 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 BMP10O95393 424 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 CYP4F8P98187 520 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 TRAP1Q12931 704 aaKnown RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 UPP1Q16831 310 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 RBM44Q6ZP01 1051 aaKnown RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 SERINC5Q86VE9 423 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 CPNE9Q8IYJ1 553 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 C8orf59Q8N0T1 100 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 C10orf53Q8N6V4 93 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 SIDT2Q8NBJ9 832 aaKnown RBP17.07■□□□□ 0.32
PHRF1-206ENST00000534320 KREMEN2Q8NCW0 462 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 OR13C4Q8NGS5 318 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 FAM83DQ9H4H8 585 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 ABCB10Q9NRK6 738 aa17.07■□□□□ 0.32
PHRF1-206ENST00000534320 PTPN2P17706 415 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms