RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TPSAB1Q15661 275 aa20.16■□□□□ 0.82
CCS-208ENST00000533244 GPR33Q49SQ1 333 aa20.16■□□□□ 0.82
CCS-208ENST00000533244 CCDC137Q6PK04 289 aaKnown RBP20.16■□□□□ 0.82
CCS-208ENST00000533244 ULK4Q96C45 1275 aa20.16■□□□□ 0.82
CCS-208ENST00000533244 CDKN2AIPNLQ96HQ2 116 aa20.16■□□□□ 0.82
CCS-208ENST00000533244 NAPGQ99747 312 aaPredicted RBP20.16■□□□□ 0.82
CCS-208ENST00000533244 A0A1W2PQM1 296 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 HEATR9A2RTY3 570 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 GAS8O95995 478 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 ADRA1DP25100 572 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 FASLGP48023 281 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 CDK16Q00536 496 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 B4GALNT1Q00973 533 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 ACVR1Q04771 509 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 LAMB3Q13751 1172 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 KCTD19Q17RG1 926 aaPredicted RBP20.15■□□□□ 0.82
CCS-208ENST00000533244 CCDC38Q502W7 563 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 ZNF534Q76KX8 674 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 SPRED1Q7Z699 444 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 TRAPPC5Q8IUR0 188 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 NXPE1Q8N323 547 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 SLC37A2Q8TED4 501 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 TTC25Q96NG3 672 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 DEPDC7Q96QD5 511 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 KLC4Q9NSK0 619 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 WDFY3Q8IZQ1 3526 aa20.15■□□□□ 0.82
CCS-208ENST00000533244 IGLV3-16A0A075B6K0 115 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 GOLGA6L10A0A0M3HER8 536 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 KRT14P02533 472 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 PROS1P07225 676 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 F3P13726 295 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 ARSDP51689 593 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 PDX1P52945 283 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 DMPKQ09013 629 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 KCNJ11Q14654 390 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 TRIP13Q15645 432 aaPredicted RBP20.14■□□□□ 0.81
CCS-208ENST00000533244 INSCQ1MX18 579 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 SKIDA1Q1XH10 827 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 PLA2G4EQ3MJ16 856 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 TSTD2Q5T7W7 516 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 IYDQ6PHW0 289 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 MICALCLQ6ZW33 695 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 CCNJLQ8IV13 435 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 OR13J1Q8NGT2 312 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 PEX13Q92968 403 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 CRLS1Q9UJA2 301 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 TCAF1Q9Y4C2 921 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 DNMT3AQ9Y6K1 912 aaPredicted RBP20.14■□□□□ 0.81
CCS-208ENST00000533244 SLC30A1Q9Y6M5 507 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 FREM2Q5SZK8 3169 aa20.14■□□□□ 0.81
CCS-208ENST00000533244 TCRBV7S3A2A0A539 114 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 TMEM8BA6NDV4 472 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 TRABD2BA6NFA1 517 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 PPM1DO15297 605 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 SGTAO43765 313 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 KCNJ13O60928 360 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 MSH3P20585 1137 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 CCL7P80098 99 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 GPS1Q13098 491 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 ISXQ2M1V0 245 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.13■□□□□ 0.81
CCS-208ENST00000533244 RBM44Q6ZP01 1051 aaKnown RBP20.13■□□□□ 0.81
CCS-208ENST00000533244 CREG2Q8IUH2 290 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 KDF1Q8NAX2 398 aaPredicted RBP20.13■□□□□ 0.81
CCS-208ENST00000533244 CCDC97Q96F63 343 aaPredicted RBP20.13■□□□□ 0.81
CCS-208ENST00000533244 ZNF514Q96K75 400 aaPredicted RBP20.13■□□□□ 0.81
CCS-208ENST00000533244 LRRN3Q9H3W5 708 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 SAR1BQ9Y6B6 198 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 EPG5Q9HCE0 2579 aa20.13■□□□□ 0.81
CCS-208ENST00000533244 KIR2DS5A0A0G2JLQ3 304 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 A0A0G2JNG1 304 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 D6RAR5 112 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 KIR2DS3K7RE56 304 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 AP3B1O00203 1094 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 CSO75390 466 aaKnown RBP20.12■□□□□ 0.81
CCS-208ENST00000533244 RPLP0P05388 317 aaKnown RBP20.12■□□□□ 0.81
CCS-208ENST00000533244 SLC2A4P14672 509 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 AKT1P31749 480 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 GPR3P46089 330 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 VPS41P49754 854 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 CDKN1CP49918 316 aaPredicted RBP20.12■□□□□ 0.81
CCS-208ENST00000533244 CACNG1Q06432 222 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 SPIDRQ14159 915 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 KIR2DS5Q14953 304 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 BCL7AQ4VC05 210 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 LRRC8BQ6P9F7 803 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 TMEM220Q6QAJ8 160 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 WASH2PQ6VEQ5 465 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 NLRP9Q7RTR0 991 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 PIANPQ8IYJ0 282 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 GRK7Q8WTQ7 553 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 HEXDCQ8WVB3 486 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 GRAMD1AQ96CP6 724 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 ZNF778Q96MU6 729 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 COPS8Q99627 209 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 NRSN2Q9GZP1 204 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 FAM96AQ9H5X1 160 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 SARS2Q9NP81 518 aaKnown RBP20.12■□□□□ 0.81
CCS-208ENST00000533244 WASH6PQ9NQA3 447 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 PRDM8Q9NQV8 689 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms