RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MT-ATP6P00846 226 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CD63P08962 238 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 DDX5P17844 614 aaKnown RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 EDN2P20800 178 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 ACP1P24666 158 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 DNAJB1P25685 340 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CFPP27918 469 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CHATP28329 748 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CASQ1P31415 396 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SFNP31947 248 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 UCP2P55851 309 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 EEFSECP57772 596 aaKnown RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 ACTR1AP61163 376 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 PRKCZQ05513 592 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CETN1Q12798 172 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 FOXL1Q12952 345 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 GRIK3Q13003 919 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SGCGQ13326 291 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 MFSD13AQ14CX5 517 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 HSPB2Q16082 182 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 UGP2Q16851 508 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 PLEKHO1Q53GL0 409 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CCDC183Q5T5S1 534 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TMEM198Q66K66 360 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CCBE1Q6UXH8 406 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 ZBTB49Q6ZSB9 765 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 LCNL1Q6ZST4 164 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TTLL10Q6ZVT0 673 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 DPPA4Q7L190 304 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 PRSS42Q7Z5A4 293 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TAF8Q7Z7C8 310 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TLK2Q86UE8 772 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TAX1BP1Q86VP1 789 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 LRRC56Q8IYG6 542 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CFAP206Q8IYR0 622 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 UXS1Q8NBZ7 420 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 MCPH1Q8NEM0 835 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 GJC3Q8NFK1 279 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 NEK11Q8NG66 645 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 FEZF2Q8TBJ5 459 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 HEXDCQ8WVB3 486 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 UBLCP1Q8WVY7 318 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CAVIN3Q969G5 261 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 RFKQ969G6 155 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 VCPIP1Q96JH7 1222 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SAMD8Q96LT4 415 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 NSMCE2Q96MF7 247 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 MUS81Q96NY9 551 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 KLHL5Q96PQ7 755 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 LRRC37BQ96QE4 947 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 ACOX2Q99424 681 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SSX3Q99909 188 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 PCGF1Q9BSM1 259 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TBCDQ9BTW9 1192 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 KATNB1Q9BVA0 655 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SGPP1Q9BX95 441 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TEX13AQ9BXU3 409 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 FRMD8Q9BZ67 464 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 TKTL2Q9H0I9 626 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CDT1Q9H211 546 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 MINDY3Q9H8M7 445 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SRD5A3Q9H8P0 318 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SERTAD4Q9NUC0 356 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 FLRT1Q9NZU1 646 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 ANKMY1Q9P2S6 941 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 DBNLQ9UJU6 430 aaKnown RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CAB39Q9Y376 341 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 HEMK1Q9Y5R4 338 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CLIC4Q9Y696 253 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 ASTN2O75129 1339 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 UBE4BO95155 1302 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 XDHP47989 1333 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 CTAGE9A4FU28 777 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TMEM8BA6NDV4 472 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ZNF503-AS2A6NEH8 195 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 CFAP73A6NFT4 308 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 FAM25EA8MYX2 175 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 AHRRA9YTQ3 701 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 BTBD19C9JJ37 291 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 H0YCG3 227 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TRIM77I1YAP6 450 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 CLIC1O00299 241 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TTI1O43156 1089 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 NDUFS4O43181 175 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 MSI1O43347 362 aaKnown RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 KLK8O60259 260 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 SELENOFO60613 162 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 CREG1O75629 220 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ZWINTO95229 277 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 PDGFBP01127 241 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 C9P02748 559 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 RAB40ALP0C0E4 278 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 PLA2G4BP0C869 781 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 PDHBP11177 359 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 PRG2P13727 222 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 SRD5A1P18405 259 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 CD58P19256 250 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ACAT1P24752 427 aaKnown RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ITGB8P26012 769 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms