RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 MBD2Q9UBB5 411 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 R3HDM2Q9Y2K5 976 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PIK3C2AO00443 1686 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 MAGEB3O15480 346 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 LRCH4O75427 683 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 STBD1O95210 358 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 GIMD1P0DJR0 217 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 C2orf80Q0P641 193 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 MED22Q15528 200 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 GPR107Q5VW38 600 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 DENND5AQ6IQ26 1287 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 LIN54Q6MZP7 749 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 TRPV3Q8NET8 790 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 OR10H5Q8NGA6 315 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SMG7Q92540 1137 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 WDR12Q9GZL7 423 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PCBD2Q9H0N5 130 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 ELL3Q9HB65 397 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 EQTNQ9NQ60 294 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 CHRAC1Q9NRG0 131 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 INTS10Q9NVR2 710 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 IFT80Q9P2H3 777 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 MTRRQ9UBK8 725 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 LGALS13Q9UHV8 139 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 ATP6AP2A0A1C7CYW4 349 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 NPHS1O60500 1241 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 ATP6AP2O75787 350 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PIAS1O75925 651 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 EPHX1P07099 455 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PAX7P23759 505 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SPRYD7Q5W111 196 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 GLYATQ6IB77 296 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 CHST15Q7LFX5 561 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SERPINA9Q86WD7 417 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 GJD3Q8N144 294 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 C2orf73Q8N5S3 287 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 AZIN2Q96A70 460 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 HEPHQ9BQS7 1158 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 IGLV3-22A0A075B6J6 115 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SOWAHBA6NEL2 793 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 GLTPD2A6NH11 291 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 TIPRLO75663 272 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 OR5F1O95221 314 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 TOP3BO95985 862 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 IGFBP5P24593 272 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 NMBRP28336 390 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 QPCTQ16769 361 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 LINGO4Q6UY18 593 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 UNC5BQ8IZJ1 945 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PRRG4Q9BZD6 226 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 IKZF4Q9H2S9 585 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 IPPKQ9H8X2 491 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 MCM8Q9UJA3 840 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 DHRS7Q9Y394 339 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 MPZL2O60487 215 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 NT5EP21589 574 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 ACADLP28330 430 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PBX3P40426 434 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 LSM3P62310 102 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 RHAGQ02094 409 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 TIGD2Q4W5G0 525 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF697Q5TEC3 545 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PIK3R6Q5UE93 754 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SAPCD2Q86UD0 394 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 CIR1Q86X95 450 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SRFBP1Q8NEF9 429 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 OR14C36Q8NHC7 312 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PSMA8Q8TAA3 256 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 NKD2Q969F2 451 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 OMA1Q96E52 524 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 APOLD1Q96LR9 279 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 WRAP53Q9BUR4 548 aaKnown RBP8.41□□□□□ -1.06
CTNND1-227ENST00000530748 DSN1Q9H410 356 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 SEC14L3Q9UDX4 400 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 PSMD13Q9UNM6 376 aa8.41□□□□□ -1.06
CTNND1-227ENST00000530748 IGKV6D-41A0A0C4DH26 115 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 BCKDKO14874 412 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 C2P06681 752 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 TCF4P15884 667 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 CCNFP41002 786 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 CDH13P55290 713 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 OLR1P78380 273 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 RFTN1Q14699 578 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-227ENST00000530748 MSANTD2Q6P1R3 559 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 CDH24Q86UP0 819 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 SLC30A8Q8IWU4 369 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 GPR135Q8IZ08 494 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 PGAM4Q8N0Y7 254 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 SVOPLQ8N434 492 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 UBR7Q8N806 425 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 ATAD1Q8NBU5 361 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 PJA1Q8NG27 643 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 ROPN1LQ96C74 230 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 LMLNQ96KR4 655 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 TMEM138Q9NPI0 162 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 ARHGEF4Q9NR80 690 aa8.4□□□□□ -1.06
CTNND1-227ENST00000530748 TRMT13Q9NUP7 481 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms