RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 OVCA2Q8WZ82 227 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 CCDC138Q96M89 665 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 DCUN1D5Q9BTE7 237 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 ERGIC3Q9Y282 383 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 TRIM64BA6NI03 449 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 NDUFS3O75489 264 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 PRLP01236 227 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 DNAJB13P59910 316 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 CYP4F8P98187 520 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 ACVR1Q04771 509 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.57
USP35-207ENST00000530546 ATP1A4Q13733 1029 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 FRA10AC1Q70Z53 315 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 GET4Q7L5D6 327 aaPredicted RBP11.46□□□□□ -0.57
USP35-207ENST00000530546 PCYOX1LQ8NBM8 494 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 CNDP1Q96KN2 507 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 ANKRD60Q9BZ19 345 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 TM6SF2Q9BZW4 377 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 ARMC7Q9H6L4 198 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 FKBPLQ9UIM3 349 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 TSR3Q9UJK0 312 aaKnown RBP11.46□□□□□ -0.57
USP35-207ENST00000530546 C2orf81A6NN90 581 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 SLCO1B7G3V0H7 640 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 UBXN8O00124 270 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 BCAS2O75934 225 aaPredicted RBP11.46□□□□□ -0.57
USP35-207ENST00000530546 SRP72O76094 671 aaKnown RBP11.46□□□□□ -0.57
USP35-207ENST00000530546 SIX3O95343 332 aaPredicted RBP11.46□□□□□ -0.57
USP35-207ENST00000530546 ACRP10323 421 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 HDCP19113 662 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 CR2P20023 1033 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 FDXRP22570 491 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 DCKP27707 260 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 STC1P52823 247 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 EPHB3P54753 998 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 TIAL1Q01085 375 aaKnown RBP eCLIP11.46□□□□□ -0.57
USP35-207ENST00000530546 TRAF2Q12933 501 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 IL23RQ5VWK5 629 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 TPGS2Q68CL5 300 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 OGFOD2Q6N063 350 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 TMEM150AQ86TG1 271 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 PTGR2Q8N8N7 351 aaPredicted RBP11.46□□□□□ -0.57
USP35-207ENST00000530546 KYQ8NBH2 561 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 BHLHE22Q8NFJ8 381 aaPredicted RBP11.46□□□□□ -0.57
USP35-207ENST00000530546 WFDC5Q8TCV5 224 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 RCN3Q96D15 328 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 VWCEQ96DN2 955 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 MYRFLQ96LU7 910 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 TMEM79Q9BSE2 394 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 PARVBQ9HBI1 364 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 CPQQ9Y646 472 aa11.46□□□□□ -0.57
USP35-207ENST00000530546 ATP6AP2A0A1C7CYW4 349 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 K7ERQ8 282 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 KPNA4O00629 521 aaPredicted RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 SDHDO14521 159 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 GPR39O43194 453 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 ATP6AP2O75787 350 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 PABPC1P11940 636 aaKnown RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 GJA1P17302 382 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 CTPS1P17812 591 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 ZNF140P52738 457 aaPredicted RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 THOP1P52888 689 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 ARPC4P59998 168 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 ZXDBP98169 803 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 ZRANB3Q5FWF4 1079 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 EGFLAMQ63HQ2 1017 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 SETD3Q86TU7 594 aaPredicted RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 HERC6Q8IVU3 1022 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 FIBCD1Q8N539 461 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 TNIP2Q8NFZ5 429 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 TOP1MTQ969P6 601 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 TMA16Q96EY4 203 aaKnown RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 RPF2Q9H7B2 306 aaKnown RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 NLE1Q9NVX2 485 aaPredicted RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 POLR3BQ9NW08 1133 aaPredicted RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 INSL5Q9Y5Q6 135 aa11.46□□□□□ -0.58
USP35-207ENST00000530546 COPG1Q9Y678 874 aaKnown RBP11.46□□□□□ -0.58
USP35-207ENST00000530546 PDE4DIPQ5VU43 2346 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 RGSL1A5PLK6 1076 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 FAM47E-STBD1D6RA91 191 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 CFAP99D6REC4 459 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 H3BMM5 538 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 GIPC1O14908 333 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 AQP9O43315 295 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 CD160O95971 181 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 BMP1P13497 986 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 ENO3P13929 434 aaPredicted RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 CD1DP15813 335 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 MSX2P35548 267 aaPredicted RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 CSKP41240 450 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 C1QTNF8P60827 252 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 RHOAP61586 193 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 CDH18Q13634 790 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 NR1D2Q14995 579 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 OR4D1Q15615 310 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 SLC14A2Q15849 920 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 PPP1R3AQ16821 1122 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 PFKFB4Q16877 469 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 GEN1Q17RS7 908 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 ALG1LQ6GMV1 187 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 PAQR3Q6TCH7 311 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms